Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhb22Q91XZ8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb22Q91XZ8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb22Q91XZ8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb22Q91XZ8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb22Q91XZ8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Pcdhb22Q91XZ8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Pcdhb22Q91XZ8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.46■□□□□ 0.71
Pcdhb22Q91XZ8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Pcdhb22Q91XZ8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb22Q91XZ8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.46■□□□□ 0.71
Pcdhb22Q91XZ8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb22Q91XZ8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb22Q91XZ8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb22Q91XZ8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb22Q91XZ8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb22Q91XZ8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb22Q91XZ8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb22Q91XZ8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb22Q91XZ8 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.45■□□□□ 0.7
Pcdhb22Q91XZ8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb22Q91XZ8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.45■□□□□ 0.7
Pcdhb22Q91XZ8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Pcdhb22Q91XZ8 Gm23634-201ENSMUST00000175071 91 ntBASIC19.45■□□□□ 0.7
Pcdhb22Q91XZ8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.45■□□□□ 0.7
Pcdhb22Q91XZ8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.45■□□□□ 0.7
Pcdhb22Q91XZ8 Gm5587-201ENSMUST00000206270 674 ntBASIC19.45■□□□□ 0.7
Pcdhb22Q91XZ8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb22Q91XZ8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb22Q91XZ8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb22Q91XZ8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb22Q91XZ8 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.45■□□□□ 0.7
Pcdhb22Q91XZ8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb22Q91XZ8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb22Q91XZ8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb22Q91XZ8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb22Q91XZ8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Pcdhb22Q91XZ8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Pcdhb22Q91XZ8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdhb22Q91XZ8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.44■□□□□ 0.7
Pcdhb22Q91XZ8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhb22Q91XZ8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb22Q91XZ8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb22Q91XZ8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb22Q91XZ8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb22Q91XZ8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb22Q91XZ8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Pcdhb22Q91XZ8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb22Q91XZ8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb22Q91XZ8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb22Q91XZ8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pcdhb22Q91XZ8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb22Q91XZ8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb22Q91XZ8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb22Q91XZ8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb22Q91XZ8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb22Q91XZ8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb22Q91XZ8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb22Q91XZ8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.43■□□□□ 0.7
Pcdhb22Q91XZ8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pcdhb22Q91XZ8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb22Q91XZ8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb22Q91XZ8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb22Q91XZ8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.42■□□□□ 0.7
Pcdhb22Q91XZ8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb22Q91XZ8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb22Q91XZ8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb22Q91XZ8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb22Q91XZ8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb22Q91XZ8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Pcdhb22Q91XZ8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb22Q91XZ8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.42■□□□□ 0.7
Pcdhb22Q91XZ8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb22Q91XZ8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb22Q91XZ8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb22Q91XZ8 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.42■□□□□ 0.7
Pcdhb22Q91XZ8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb22Q91XZ8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb22Q91XZ8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb22Q91XZ8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb22Q91XZ8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb22Q91XZ8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb22Q91XZ8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb22Q91XZ8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.41■□□□□ 0.7
Pcdhb22Q91XZ8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb22Q91XZ8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb22Q91XZ8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Pcdhb22Q91XZ8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb22Q91XZ8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb22Q91XZ8 Gm25016-201ENSMUST00000158399 131 ntBASIC19.41■□□□□ 0.7
Pcdhb22Q91XZ8 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.41■□□□□ 0.7
Pcdhb22Q91XZ8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb22Q91XZ8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.41■□□□□ 0.7
Pcdhb22Q91XZ8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.41■□□□□ 0.7
Pcdhb22Q91XZ8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb22Q91XZ8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb22Q91XZ8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb22Q91XZ8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb22Q91XZ8 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.41■□□□□ 0.7
Pcdhb22Q91XZ8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms