Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.14■□□□□ 0.81
Ccdc9Q8VC31 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.14■□□□□ 0.81
Ccdc9Q8VC31 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc9Q8VC31 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.14■□□□□ 0.81
Ccdc9Q8VC31 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc9Q8VC31 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc9Q8VC31 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc9Q8VC31 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Ccdc9Q8VC31 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc9Q8VC31 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc9Q8VC31 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc9Q8VC31 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc9Q8VC31 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc9Q8VC31 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc9Q8VC31 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc9Q8VC31 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc9Q8VC31 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc9Q8VC31 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc9Q8VC31 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc9Q8VC31 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc9Q8VC31 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Ccdc9Q8VC31 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc9Q8VC31 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc9Q8VC31 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc9Q8VC31 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc9Q8VC31 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Ccdc9Q8VC31 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.13■□□□□ 0.81
Ccdc9Q8VC31 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc9Q8VC31 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Ccdc9Q8VC31 Gm37736-201ENSMUST00000193564 2802 ntBASIC20.13■□□□□ 0.81
Ccdc9Q8VC31 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc9Q8VC31 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc9Q8VC31 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.13■□□□□ 0.81
Ccdc9Q8VC31 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc9Q8VC31 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc9Q8VC31 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc9Q8VC31 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc9Q8VC31 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc9Q8VC31 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc9Q8VC31 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.12■□□□□ 0.81
Ccdc9Q8VC31 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC20.12■□□□□ 0.81
Ccdc9Q8VC31 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc9Q8VC31 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.12■□□□□ 0.81
Ccdc9Q8VC31 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Ccdc9Q8VC31 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc9Q8VC31 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc9Q8VC31 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc9Q8VC31 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc9Q8VC31 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc9Q8VC31 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC20.12■□□□□ 0.81
Ccdc9Q8VC31 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc9Q8VC31 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc9Q8VC31 Prob1-201ENSMUST00000097619 3021 ntBASIC20.12■□□□□ 0.81
Ccdc9Q8VC31 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc9Q8VC31 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC20.12■□□□□ 0.81
Ccdc9Q8VC31 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc9Q8VC31 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc9Q8VC31 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ccdc9Q8VC31 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc9Q8VC31 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Ccdc9Q8VC31 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc9Q8VC31 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc9Q8VC31 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc9Q8VC31 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc9Q8VC31 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC20.11■□□□□ 0.81
Ccdc9Q8VC31 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc9Q8VC31 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc9Q8VC31 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Ccdc9Q8VC31 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.11■□□□□ 0.81
Ccdc9Q8VC31 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.11■□□□□ 0.81
Ccdc9Q8VC31 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc9Q8VC31 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc9Q8VC31 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.11■□□□□ 0.81
Ccdc9Q8VC31 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc9Q8VC31 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc9Q8VC31 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc9Q8VC31 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc9Q8VC31 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc9Q8VC31 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccdc9Q8VC31 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ccdc9Q8VC31 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ccdc9Q8VC31 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Ccdc9Q8VC31 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc9Q8VC31 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc9Q8VC31 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc9Q8VC31 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc9Q8VC31 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ccdc9Q8VC31 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc9Q8VC31 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.1■□□□□ 0.81
Ccdc9Q8VC31 Gm43060-201ENSMUST00000200621 289 ntBASIC20.1■□□□□ 0.81
Ccdc9Q8VC31 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc9Q8VC31 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc9Q8VC31 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc9Q8VC31 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc9Q8VC31 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC20.1■□□□□ 0.81
Ccdc9Q8VC31 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ccdc9Q8VC31 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ccdc9Q8VC31 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc9Q8VC31 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccdc9Q8VC31 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms