Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
ABCA6Q8N139 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
ABCA6Q8N139 FBXW4P1-201ENST00000426721 2239 ntBASIC28.99■■■□□ 2.23
ABCA6Q8N139 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
ABCA6Q8N139 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC28.98■■■□□ 2.23
ABCA6Q8N139 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
ABCA6Q8N139 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC28.98■■■□□ 2.23
ABCA6Q8N139 KRT17P6-201ENST00000453795 1220 ntBASIC28.98■■■□□ 2.23
ABCA6Q8N139 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC28.98■■■□□ 2.23
ABCA6Q8N139 BX119927.1-201ENST00000636596 1552 ntBASIC28.98■■■□□ 2.23
ABCA6Q8N139 KRT8P11-201ENST00000409686 1436 ntBASIC28.98■■■□□ 2.23
ABCA6Q8N139 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
ABCA6Q8N139 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC28.98■■■□□ 2.23
ABCA6Q8N139 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC28.98■■■□□ 2.23
ABCA6Q8N139 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC28.98■■■□□ 2.23
ABCA6Q8N139 WDR6-223ENST00000627177 207 ntTSL 2 BASIC28.98■■■□□ 2.23
ABCA6Q8N139 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC28.97■■■□□ 2.23
ABCA6Q8N139 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC28.97■■■□□ 2.23
ABCA6Q8N139 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC28.97■■■□□ 2.23
ABCA6Q8N139 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
ABCA6Q8N139 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
ABCA6Q8N139 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
ABCA6Q8N139 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC28.97■■■□□ 2.23
ABCA6Q8N139 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC28.97■■■□□ 2.23
ABCA6Q8N139 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC28.97■■■□□ 2.23
ABCA6Q8N139 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC28.97■■■□□ 2.23
ABCA6Q8N139 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC28.97■■■□□ 2.23
ABCA6Q8N139 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC28.97■■■□□ 2.23
ABCA6Q8N139 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC28.96■■■□□ 2.23
ABCA6Q8N139 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC28.96■■■□□ 2.23
ABCA6Q8N139 AC092720.2-201ENST00000602388 1665 ntBASIC28.96■■■□□ 2.23
ABCA6Q8N139 AC006128.1-201ENST00000624704 1661 ntBASIC28.96■■■□□ 2.23
ABCA6Q8N139 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC28.96■■■□□ 2.23
ABCA6Q8N139 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC28.96■■■□□ 2.23
ABCA6Q8N139 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
ABCA6Q8N139 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC28.96■■■□□ 2.23
ABCA6Q8N139 NME1-207ENST00000480143 964 ntTSL 2 BASIC28.96■■■□□ 2.23
ABCA6Q8N139 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
ABCA6Q8N139 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
ABCA6Q8N139 CR769767.2-201ENST00000622735 460 ntBASIC28.96■■■□□ 2.23
ABCA6Q8N139 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC28.96■■■□□ 2.23
ABCA6Q8N139 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
ABCA6Q8N139 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC28.95■■■□□ 2.23
ABCA6Q8N139 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC28.95■■■□□ 2.23
ABCA6Q8N139 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC28.95■■■□□ 2.23
ABCA6Q8N139 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC28.95■■■□□ 2.23
ABCA6Q8N139 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC28.95■■■□□ 2.22
ABCA6Q8N139 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC28.95■■■□□ 2.22
ABCA6Q8N139 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC28.94■■■□□ 2.22
ABCA6Q8N139 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC28.94■■■□□ 2.22
ABCA6Q8N139 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC28.94■■■□□ 2.22
ABCA6Q8N139 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC28.94■■■□□ 2.22
ABCA6Q8N139 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
ABCA6Q8N139 MIR3652-201ENST00000579335 131 ntBASIC28.94■■■□□ 2.22
ABCA6Q8N139 AC004263.2-201ENST00000617183 678 ntBASIC28.94■■■□□ 2.22
ABCA6Q8N139 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC28.94■■■□□ 2.22
ABCA6Q8N139 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC28.94■■■□□ 2.22
ABCA6Q8N139 AC133561.1-201ENST00000568600 2415 ntBASIC28.94■■■□□ 2.22
ABCA6Q8N139 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
ABCA6Q8N139 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
ABCA6Q8N139 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC28.94■■■□□ 2.22
ABCA6Q8N139 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC28.94■■■□□ 2.22
ABCA6Q8N139 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC28.94■■■□□ 2.22
ABCA6Q8N139 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
ABCA6Q8N139 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
ABCA6Q8N139 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC28.93■■■□□ 2.22
ABCA6Q8N139 PPIH-202ENST00000372549 327 ntTSL 3 BASIC28.93■■■□□ 2.22
ABCA6Q8N139 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
ABCA6Q8N139 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC28.93■■■□□ 2.22
ABCA6Q8N139 UNC93B7-201ENST00000509439 705 ntBASIC28.93■■■□□ 2.22
ABCA6Q8N139 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC28.93■■■□□ 2.22
ABCA6Q8N139 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
ABCA6Q8N139 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC28.93■■■□□ 2.22
ABCA6Q8N139 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
ABCA6Q8N139 EP400NL-214ENST00000641289 2402 ntBASIC28.93■■■□□ 2.22
ABCA6Q8N139 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
ABCA6Q8N139 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
ABCA6Q8N139 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC28.92■■■□□ 2.22
ABCA6Q8N139 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC28.92■■■□□ 2.22
ABCA6Q8N139 TBC1D3P2-202ENST00000577902 1649 ntBASIC28.92■■■□□ 2.22
ABCA6Q8N139 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC28.92■■■□□ 2.22
ABCA6Q8N139 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC28.92■■■□□ 2.22
ABCA6Q8N139 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
ABCA6Q8N139 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC28.92■■■□□ 2.22
ABCA6Q8N139 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC28.92■■■□□ 2.22
ABCA6Q8N139 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC28.92■■■□□ 2.22
ABCA6Q8N139 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC28.92■■■□□ 2.22
ABCA6Q8N139 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC28.92■■■□□ 2.22
ABCA6Q8N139 AC007225.1-201ENST00000566331 1836 ntBASIC28.92■■■□□ 2.22
ABCA6Q8N139 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
ABCA6Q8N139 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC28.92■■■□□ 2.22
ABCA6Q8N139 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
ABCA6Q8N139 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
ABCA6Q8N139 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC28.92■■■□□ 2.22
ABCA6Q8N139 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC28.92■■■□□ 2.22
ABCA6Q8N139 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
ABCA6Q8N139 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC28.92■■■□□ 2.22
ABCA6Q8N139 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
ABCA6Q8N139 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
ABCA6Q8N139 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms