Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trnt1Q8K1J6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trnt1Q8K1J6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trnt1Q8K1J6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trnt1Q8K1J6 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trnt1Q8K1J6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trnt1Q8K1J6 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trnt1Q8K1J6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trnt1Q8K1J6 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.13■□□□□ 0.17
Trnt1Q8K1J6 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.13■□□□□ 0.17
Trnt1Q8K1J6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.13■□□□□ 0.17
Trnt1Q8K1J6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trnt1Q8K1J6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trnt1Q8K1J6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trnt1Q8K1J6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trnt1Q8K1J6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trnt1Q8K1J6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trnt1Q8K1J6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trnt1Q8K1J6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trnt1Q8K1J6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trnt1Q8K1J6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trnt1Q8K1J6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trnt1Q8K1J6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnt1Q8K1J6 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trnt1Q8K1J6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnt1Q8K1J6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnt1Q8K1J6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnt1Q8K1J6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnt1Q8K1J6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnt1Q8K1J6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnt1Q8K1J6 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnt1Q8K1J6 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnt1Q8K1J6 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trnt1Q8K1J6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnt1Q8K1J6 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnt1Q8K1J6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnt1Q8K1J6 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.12■□□□□ 0.17
Trnt1Q8K1J6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnt1Q8K1J6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnt1Q8K1J6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trnt1Q8K1J6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trnt1Q8K1J6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnt1Q8K1J6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trnt1Q8K1J6 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.12■□□□□ 0.17
Trnt1Q8K1J6 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trnt1Q8K1J6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trnt1Q8K1J6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trnt1Q8K1J6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trnt1Q8K1J6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trnt1Q8K1J6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trnt1Q8K1J6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trnt1Q8K1J6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trnt1Q8K1J6 Actl10-202ENSMUST00000226583 1501 ntBASIC16.11■□□□□ 0.17
Trnt1Q8K1J6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trnt1Q8K1J6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trnt1Q8K1J6 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trnt1Q8K1J6 Gm43799-201ENSMUST00000201845 579 ntBASIC16.11■□□□□ 0.17
Trnt1Q8K1J6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.11■□□□□ 0.17
Trnt1Q8K1J6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trnt1Q8K1J6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trnt1Q8K1J6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trnt1Q8K1J6 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trnt1Q8K1J6 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trnt1Q8K1J6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
Trnt1Q8K1J6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trnt1Q8K1J6 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trnt1Q8K1J6 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trnt1Q8K1J6 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnt1Q8K1J6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnt1Q8K1J6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnt1Q8K1J6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trnt1Q8K1J6 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trnt1Q8K1J6 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.1■□□□□ 0.17
Trnt1Q8K1J6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.1■□□□□ 0.17
Trnt1Q8K1J6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.1■□□□□ 0.17
Trnt1Q8K1J6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnt1Q8K1J6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trnt1Q8K1J6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnt1Q8K1J6 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnt1Q8K1J6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnt1Q8K1J6 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnt1Q8K1J6 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnt1Q8K1J6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnt1Q8K1J6 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trnt1Q8K1J6 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trnt1Q8K1J6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trnt1Q8K1J6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trnt1Q8K1J6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trnt1Q8K1J6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trnt1Q8K1J6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trnt1Q8K1J6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trnt1Q8K1J6 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trnt1Q8K1J6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trnt1Q8K1J6 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trnt1Q8K1J6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trnt1Q8K1J6 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trnt1Q8K1J6 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trnt1Q8K1J6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trnt1Q8K1J6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.09■□□□□ 0.17
Trnt1Q8K1J6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms