Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rdh1Q8CGV4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rdh1Q8CGV4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.2■□□□□ 0.18
Rdh1Q8CGV4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rdh1Q8CGV4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rdh1Q8CGV4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Rdh1Q8CGV4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rdh1Q8CGV4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rdh1Q8CGV4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rdh1Q8CGV4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rdh1Q8CGV4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rdh1Q8CGV4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rdh1Q8CGV4 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rdh1Q8CGV4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rdh1Q8CGV4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.19■□□□□ 0.18
Rdh1Q8CGV4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rdh1Q8CGV4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rdh1Q8CGV4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rdh1Q8CGV4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Rdh1Q8CGV4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.19■□□□□ 0.18
Rdh1Q8CGV4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rdh1Q8CGV4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rdh1Q8CGV4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.19■□□□□ 0.18
Rdh1Q8CGV4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.19■□□□□ 0.18
Rdh1Q8CGV4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.19■□□□□ 0.18
Rdh1Q8CGV4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rdh1Q8CGV4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rdh1Q8CGV4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rdh1Q8CGV4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rdh1Q8CGV4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.19■□□□□ 0.18
Rdh1Q8CGV4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rdh1Q8CGV4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rdh1Q8CGV4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rdh1Q8CGV4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Rdh1Q8CGV4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rdh1Q8CGV4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.18■□□□□ 0.18
Rdh1Q8CGV4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rdh1Q8CGV4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rdh1Q8CGV4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.18■□□□□ 0.18
Rdh1Q8CGV4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rdh1Q8CGV4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rdh1Q8CGV4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.18■□□□□ 0.18
Rdh1Q8CGV4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rdh1Q8CGV4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Rdh1Q8CGV4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.18■□□□□ 0.18
Rdh1Q8CGV4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rdh1Q8CGV4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rdh1Q8CGV4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rdh1Q8CGV4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rdh1Q8CGV4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rdh1Q8CGV4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Rdh1Q8CGV4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rdh1Q8CGV4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.18■□□□□ 0.18
Rdh1Q8CGV4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rdh1Q8CGV4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rdh1Q8CGV4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rdh1Q8CGV4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rdh1Q8CGV4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rdh1Q8CGV4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rdh1Q8CGV4 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.17■□□□□ 0.18
Rdh1Q8CGV4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.17■□□□□ 0.18
Rdh1Q8CGV4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Rdh1Q8CGV4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.17■□□□□ 0.18
Rdh1Q8CGV4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.17■□□□□ 0.18
Rdh1Q8CGV4 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Rdh1Q8CGV4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rdh1Q8CGV4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Rdh1Q8CGV4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rdh1Q8CGV4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rdh1Q8CGV4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rdh1Q8CGV4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rdh1Q8CGV4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rdh1Q8CGV4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rdh1Q8CGV4 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rdh1Q8CGV4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Rdh1Q8CGV4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rdh1Q8CGV4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rdh1Q8CGV4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rdh1Q8CGV4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rdh1Q8CGV4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rdh1Q8CGV4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rdh1Q8CGV4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rdh1Q8CGV4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Rdh1Q8CGV4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rdh1Q8CGV4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rdh1Q8CGV4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.16■□□□□ 0.18
Rdh1Q8CGV4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rdh1Q8CGV4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rdh1Q8CGV4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rdh1Q8CGV4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rdh1Q8CGV4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rdh1Q8CGV4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.16■□□□□ 0.18
Rdh1Q8CGV4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh1Q8CGV4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh1Q8CGV4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh1Q8CGV4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh1Q8CGV4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh1Q8CGV4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh1Q8CGV4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rdh1Q8CGV4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms