Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Q8CD60 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q8CD60 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q8CD60 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Q8CD60 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Q8CD60 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q8CD60 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q8CD60 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q8CD60 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8CD60 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Q8CD60 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Q8CD60 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8CD60 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8CD60 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Q8CD60 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Q8CD60 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8CD60 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Q8CD60 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Q8CD60 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8CD60 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Q8CD60 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8CD60 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8CD60 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8CD60 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8CD60 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8CD60 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q8CD60 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Q8CD60 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.52■□□□□ 0.39
Q8CD60 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Q8CD60 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Q8CD60 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Q8CD60 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Q8CD60 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q8CD60 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Q8CD60 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q8CD60 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q8CD60 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Q8CD60 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Q8CD60 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q8CD60 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q8CD60 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Q8CD60 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.51■□□□□ 0.39
Q8CD60 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.51■□□□□ 0.39
Q8CD60 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.51■□□□□ 0.39
Q8CD60 Gm27389-201ENSMUST00000183622 195 ntBASIC17.51■□□□□ 0.39
Q8CD60 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.51■□□□□ 0.39
Q8CD60 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.51■□□□□ 0.39
Q8CD60 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q8CD60 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q8CD60 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q8CD60 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Q8CD60 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8CD60 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.5■□□□□ 0.39
Q8CD60 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Q8CD60 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8CD60 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8CD60 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8CD60 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Q8CD60 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Q8CD60 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8CD60 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8CD60 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Q8CD60 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Q8CD60 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Q8CD60 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Q8CD60 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8CD60 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.5■□□□□ 0.39
Q8CD60 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Q8CD60 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8CD60 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8CD60 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8CD60 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8CD60 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8CD60 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Q8CD60 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Q8CD60 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Q8CD60 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q8CD60 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q8CD60 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Q8CD60 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Q8CD60 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q8CD60 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Q8CD60 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.49■□□□□ 0.39
Q8CD60 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q8CD60 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q8CD60 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Q8CD60 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q8CD60 Gm10013-201ENSMUST00000106074 672 ntBASIC17.49■□□□□ 0.39
Q8CD60 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.49■□□□□ 0.39
Q8CD60 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q8CD60 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q8CD60 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q8CD60 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Q8CD60 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q8CD60 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q8CD60 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Q8CD60 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q8CD60 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Q8CD60 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q8CD60 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms