Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Haglr-201ENSMUST00000100000 2085 ntBASIC16.9■□□□□ 0.3
Casc4Q6P2L7 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.9■□□□□ 0.3
Casc4Q6P2L7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Casc4Q6P2L7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Casc4Q6P2L7 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Casc4Q6P2L7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.89■□□□□ 0.3
Casc4Q6P2L7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Casc4Q6P2L7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Casc4Q6P2L7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Casc4Q6P2L7 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Casc4Q6P2L7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.89■□□□□ 0.29
Casc4Q6P2L7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Casc4Q6P2L7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Casc4Q6P2L7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Casc4Q6P2L7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Casc4Q6P2L7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Casc4Q6P2L7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Casc4Q6P2L7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Casc4Q6P2L7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Casc4Q6P2L7 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.89■□□□□ 0.29
Casc4Q6P2L7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Casc4Q6P2L7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Casc4Q6P2L7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Casc4Q6P2L7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Casc4Q6P2L7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Casc4Q6P2L7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Casc4Q6P2L7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Casc4Q6P2L7 Gm7213-201ENSMUST00000215977 950 ntBASIC16.88■□□□□ 0.29
Casc4Q6P2L7 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.88■□□□□ 0.29
Casc4Q6P2L7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Casc4Q6P2L7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Casc4Q6P2L7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Casc4Q6P2L7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Casc4Q6P2L7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Casc4Q6P2L7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Casc4Q6P2L7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Casc4Q6P2L7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Casc4Q6P2L7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Casc4Q6P2L7 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Casc4Q6P2L7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Casc4Q6P2L7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Casc4Q6P2L7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.87■□□□□ 0.29
Casc4Q6P2L7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.87■□□□□ 0.29
Casc4Q6P2L7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Casc4Q6P2L7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Casc4Q6P2L7 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Casc4Q6P2L7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.86■□□□□ 0.29
Casc4Q6P2L7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Casc4Q6P2L7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Casc4Q6P2L7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Casc4Q6P2L7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Casc4Q6P2L7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Casc4Q6P2L7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.86■□□□□ 0.29
Casc4Q6P2L7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.86■□□□□ 0.29
Casc4Q6P2L7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Casc4Q6P2L7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Casc4Q6P2L7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Casc4Q6P2L7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Casc4Q6P2L7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Casc4Q6P2L7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Casc4Q6P2L7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.86■□□□□ 0.29
Casc4Q6P2L7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Casc4Q6P2L7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Casc4Q6P2L7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Casc4Q6P2L7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.85■□□□□ 0.29
Casc4Q6P2L7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Casc4Q6P2L7 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
Casc4Q6P2L7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Casc4Q6P2L7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Casc4Q6P2L7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.85■□□□□ 0.29
Casc4Q6P2L7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
Casc4Q6P2L7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Casc4Q6P2L7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Casc4Q6P2L7 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.85■□□□□ 0.29
Casc4Q6P2L7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms