Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm4Q6IRU2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm4Q6IRU2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.68■□□□□ 0.58
Tpm4Q6IRU2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm4Q6IRU2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Tpm4Q6IRU2 Gm15039-201ENSMUST00000118914 875 ntBASIC18.68■□□□□ 0.58
Tpm4Q6IRU2 Gm37292-201ENSMUST00000192062 758 ntBASIC18.68■□□□□ 0.58
Tpm4Q6IRU2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm4Q6IRU2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm4Q6IRU2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm4Q6IRU2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm4Q6IRU2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Tpm4Q6IRU2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm4Q6IRU2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tpm4Q6IRU2 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.68■□□□□ 0.58
Tpm4Q6IRU2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm4Q6IRU2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm4Q6IRU2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Tpm4Q6IRU2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm4Q6IRU2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm4Q6IRU2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm4Q6IRU2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Tpm4Q6IRU2 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.67■□□□□ 0.58
Tpm4Q6IRU2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm4Q6IRU2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Tpm4Q6IRU2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm4Q6IRU2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm4Q6IRU2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm4Q6IRU2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm4Q6IRU2 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm4Q6IRU2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tpm4Q6IRU2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Tpm4Q6IRU2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Tpm4Q6IRU2 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm4Q6IRU2 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.66■□□□□ 0.58
Tpm4Q6IRU2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Tpm4Q6IRU2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm4Q6IRU2 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm4Q6IRU2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm4Q6IRU2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.66■□□□□ 0.58
Tpm4Q6IRU2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm4Q6IRU2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm4Q6IRU2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm4Q6IRU2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm4Q6IRU2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Tpm4Q6IRU2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.66■□□□□ 0.58
Tpm4Q6IRU2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.66■□□□□ 0.58
Tpm4Q6IRU2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm4Q6IRU2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm4Q6IRU2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm4Q6IRU2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Tpm4Q6IRU2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm4Q6IRU2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm4Q6IRU2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tpm4Q6IRU2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.65■□□□□ 0.58
Tpm4Q6IRU2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm4Q6IRU2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.65■□□□□ 0.58
Tpm4Q6IRU2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm4Q6IRU2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm4Q6IRU2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Tpm4Q6IRU2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.65■□□□□ 0.58
Tpm4Q6IRU2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.65■□□□□ 0.58
Tpm4Q6IRU2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm4Q6IRU2 Trmt13-210ENSMUST00000198454 880 ntBASIC18.65■□□□□ 0.58
Tpm4Q6IRU2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm4Q6IRU2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.65■□□□□ 0.58
Tpm4Q6IRU2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm4Q6IRU2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm4Q6IRU2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Tpm4Q6IRU2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm4Q6IRU2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm4Q6IRU2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm4Q6IRU2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm4Q6IRU2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm4Q6IRU2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm4Q6IRU2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Tpm4Q6IRU2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tpm4Q6IRU2 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tpm4Q6IRU2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Tpm4Q6IRU2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Tpm4Q6IRU2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tpm4Q6IRU2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Tpm4Q6IRU2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Tpm4Q6IRU2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.64■□□□□ 0.57
Tpm4Q6IRU2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm4Q6IRU2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Tpm4Q6IRU2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm4Q6IRU2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.64■□□□□ 0.57
Tpm4Q6IRU2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm4Q6IRU2 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm4Q6IRU2 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.64■□□□□ 0.57
Tpm4Q6IRU2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Tpm4Q6IRU2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm4Q6IRU2 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm4Q6IRU2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm4Q6IRU2 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm4Q6IRU2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm4Q6IRU2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm4Q6IRU2 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm4Q6IRU2 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms