Protein–RNA interactions for Protein: P0CB42

Alkbh1, Nucleic acid dioxygenase ALKBH1, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alkbh1P0CB42 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Alkbh1P0CB42 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alkbh1P0CB42 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.81■□□□□ 0.44
Alkbh1P0CB42 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Alkbh1P0CB42 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alkbh1P0CB42 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alkbh1P0CB42 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.81■□□□□ 0.44
Alkbh1P0CB42 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.81■□□□□ 0.44
Alkbh1P0CB42 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Alkbh1P0CB42 Gm22697-201ENSMUST00000175194 63 ntBASIC17.81■□□□□ 0.44
Alkbh1P0CB42 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Alkbh1P0CB42 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alkbh1P0CB42 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alkbh1P0CB42 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alkbh1P0CB42 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alkbh1P0CB42 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alkbh1P0CB42 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alkbh1P0CB42 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.81■□□□□ 0.44
Alkbh1P0CB42 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Alkbh1P0CB42 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alkbh1P0CB42 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alkbh1P0CB42 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alkbh1P0CB42 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Alkbh1P0CB42 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Alkbh1P0CB42 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Alkbh1P0CB42 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alkbh1P0CB42 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alkbh1P0CB42 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alkbh1P0CB42 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alkbh1P0CB42 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alkbh1P0CB42 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alkbh1P0CB42 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alkbh1P0CB42 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alkbh1P0CB42 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alkbh1P0CB42 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.8■□□□□ 0.44
Alkbh1P0CB42 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Alkbh1P0CB42 Mir7071-201ENSMUST00000184847 69 ntBASIC17.8■□□□□ 0.44
Alkbh1P0CB42 Gm21559-201ENSMUST00000220638 855 ntBASIC17.8■□□□□ 0.44
Alkbh1P0CB42 Gm8587-201ENSMUST00000076538 843 ntBASIC17.8■□□□□ 0.44
Alkbh1P0CB42 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.8■□□□□ 0.44
Alkbh1P0CB42 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alkbh1P0CB42 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alkbh1P0CB42 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alkbh1P0CB42 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alkbh1P0CB42 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Alkbh1P0CB42 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alkbh1P0CB42 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Alkbh1P0CB42 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Alkbh1P0CB42 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Alkbh1P0CB42 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Alkbh1P0CB42 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Alkbh1P0CB42 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Alkbh1P0CB42 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Alkbh1P0CB42 Gm11336-201ENSMUST00000118168 334 ntBASIC17.79■□□□□ 0.44
Alkbh1P0CB42 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.79■□□□□ 0.44
Alkbh1P0CB42 Gm18101-201ENSMUST00000215769 548 ntBASIC17.79■□□□□ 0.44
Alkbh1P0CB42 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Alkbh1P0CB42 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Alkbh1P0CB42 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Alkbh1P0CB42 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Alkbh1P0CB42 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Alkbh1P0CB42 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Alkbh1P0CB42 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Alkbh1P0CB42 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Alkbh1P0CB42 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Alkbh1P0CB42 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
Alkbh1P0CB42 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Alkbh1P0CB42 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Alkbh1P0CB42 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Gm27389-201ENSMUST00000183622 195 ntBASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Alkbh1P0CB42 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms