Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Zc3h13E9Q784 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Zc3h13E9Q784 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Zc3h13E9Q784 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Zc3h13E9Q784 Gm11025-201ENSMUST00000140773 466 ntBASIC22.91■■□□□ 1.26
Zc3h13E9Q784 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Zc3h13E9Q784 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Zc3h13E9Q784 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC22.91■■□□□ 1.26
Zc3h13E9Q784 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC22.91■■□□□ 1.26
Zc3h13E9Q784 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Zc3h13E9Q784 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Zc3h13E9Q784 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC22.91■■□□□ 1.26
Zc3h13E9Q784 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Zc3h13E9Q784 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Zc3h13E9Q784 Gm13616-201ENSMUST00000120600 222 ntBASIC22.91■■□□□ 1.26
Zc3h13E9Q784 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC22.91■■□□□ 1.26
Zc3h13E9Q784 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC22.91■■□□□ 1.26
Zc3h13E9Q784 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
Zc3h13E9Q784 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Zc3h13E9Q784 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Zc3h13E9Q784 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Zc3h13E9Q784 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Zc3h13E9Q784 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Zc3h13E9Q784 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Zc3h13E9Q784 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Zc3h13E9Q784 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Zc3h13E9Q784 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC22.9■■□□□ 1.26
Zc3h13E9Q784 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC22.9■■□□□ 1.26
Zc3h13E9Q784 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Zc3h13E9Q784 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC22.9■■□□□ 1.26
Zc3h13E9Q784 Gm36967-201ENSMUST00000193814 266 ntBASIC22.9■■□□□ 1.26
Zc3h13E9Q784 AC174742.1-201ENSMUST00000218272 304 ntBASIC22.9■■□□□ 1.26
Zc3h13E9Q784 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Zc3h13E9Q784 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC22.9■■□□□ 1.26
Zc3h13E9Q784 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Zc3h13E9Q784 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Zc3h13E9Q784 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Zc3h13E9Q784 Gm3928-201ENSMUST00000121141 1307 ntBASIC22.89■■□□□ 1.26
Zc3h13E9Q784 Ddx41-204ENSMUST00000224765 2199 ntBASIC22.89■■□□□ 1.26
Zc3h13E9Q784 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Zc3h13E9Q784 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
Zc3h13E9Q784 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Zc3h13E9Q784 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC22.89■■□□□ 1.26
Zc3h13E9Q784 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC22.89■■□□□ 1.26
Zc3h13E9Q784 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Zc3h13E9Q784 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Zc3h13E9Q784 Gm7222-201ENSMUST00000117512 906 ntBASIC22.88■■□□□ 1.25
Zc3h13E9Q784 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Zc3h13E9Q784 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Zc3h13E9Q784 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Zc3h13E9Q784 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Zc3h13E9Q784 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Zc3h13E9Q784 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Zc3h13E9Q784 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Zc3h13E9Q784 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Zc3h13E9Q784 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Zc3h13E9Q784 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC22.88■■□□□ 1.25
Zc3h13E9Q784 Gm44945-201ENSMUST00000206764 1187 ntBASIC22.88■■□□□ 1.25
Zc3h13E9Q784 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Zc3h13E9Q784 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Zc3h13E9Q784 Gm37500-201ENSMUST00000192059 1443 ntBASIC22.88■■□□□ 1.25
Zc3h13E9Q784 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Zc3h13E9Q784 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC22.87■■□□□ 1.25
Zc3h13E9Q784 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Zc3h13E9Q784 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Zc3h13E9Q784 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Zc3h13E9Q784 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC22.87■■□□□ 1.25
Zc3h13E9Q784 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Zc3h13E9Q784 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC22.87■■□□□ 1.25
Zc3h13E9Q784 Gm5682-201ENSMUST00000173402 505 ntBASIC22.87■■□□□ 1.25
Zc3h13E9Q784 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Zc3h13E9Q784 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Zc3h13E9Q784 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Zc3h13E9Q784 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Zc3h13E9Q784 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Zc3h13E9Q784 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Zc3h13E9Q784 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Zc3h13E9Q784 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Zc3h13E9Q784 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Zc3h13E9Q784 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Zc3h13E9Q784 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Zc3h13E9Q784 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Zc3h13E9Q784 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Zc3h13E9Q784 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC22.86■■□□□ 1.25
Zc3h13E9Q784 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC22.86■■□□□ 1.25
Zc3h13E9Q784 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
Zc3h13E9Q784 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Zc3h13E9Q784 Gm6858-201ENSMUST00000208582 1468 ntBASIC22.86■■□□□ 1.25
Zc3h13E9Q784 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Zc3h13E9Q784 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Zc3h13E9Q784 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Zc3h13E9Q784 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Zc3h13E9Q784 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Zc3h13E9Q784 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Zc3h13E9Q784 Gm11764-201ENSMUST00000120221 623 ntBASIC22.85■■□□□ 1.25
Zc3h13E9Q784 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC22.85■■□□□ 1.25
Zc3h13E9Q784 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Zc3h13E9Q784 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC22.85■■□□□ 1.25
Zc3h13E9Q784 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Zc3h13E9Q784 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms