Protein–RNA interactions for Protein: C0HKE2

Hist1h2ac, Histone H2A type 1-C, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2acC0HKE2 Timm23-208ENSMUST00000226683 750 ntBASIC15.28■□□□□ 0.04
Hist1h2acC0HKE2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Hist1h2acC0HKE2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hist1h2acC0HKE2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hist1h2acC0HKE2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hist1h2acC0HKE2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
Hist1h2acC0HKE2 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hist1h2acC0HKE2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hist1h2acC0HKE2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hist1h2acC0HKE2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hist1h2acC0HKE2 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hist1h2acC0HKE2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Hist1h2acC0HKE2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hist1h2acC0HKE2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hist1h2acC0HKE2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hist1h2acC0HKE2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Hist1h2acC0HKE2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Hist1h2acC0HKE2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hist1h2acC0HKE2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hist1h2acC0HKE2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hist1h2acC0HKE2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hist1h2acC0HKE2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hist1h2acC0HKE2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Hist1h2acC0HKE2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hist1h2acC0HKE2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hist1h2acC0HKE2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hist1h2acC0HKE2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hist1h2acC0HKE2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hist1h2acC0HKE2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hist1h2acC0HKE2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.27■□□□□ 0.04
Hist1h2acC0HKE2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hist1h2acC0HKE2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hist1h2acC0HKE2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.27■□□□□ 0.04
Hist1h2acC0HKE2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.27■□□□□ 0.04
Hist1h2acC0HKE2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.27■□□□□ 0.04
Hist1h2acC0HKE2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hist1h2acC0HKE2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
Hist1h2acC0HKE2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hist1h2acC0HKE2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hist1h2acC0HKE2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Hist1h2acC0HKE2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Gm7638-201ENSMUST00000121348 967 ntBASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hist1h2acC0HKE2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h2acC0HKE2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h2acC0HKE2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h2acC0HKE2 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h2acC0HKE2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Hist1h2acC0HKE2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h2acC0HKE2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Hist1h2acC0HKE2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h2acC0HKE2 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.25■□□□□ 0.03
Hist1h2acC0HKE2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.25■□□□□ 0.03
Hist1h2acC0HKE2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h2acC0HKE2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Hist1h2acC0HKE2 Gm10812-201ENSMUST00000099864 546 ntBASIC15.25■□□□□ 0.03
Hist1h2acC0HKE2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h2acC0HKE2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h2acC0HKE2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.25■□□□□ 0.03
Hist1h2acC0HKE2 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h2acC0HKE2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Hist1h2acC0HKE2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h2acC0HKE2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Hist1h2acC0HKE2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h2acC0HKE2 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Hist1h2acC0HKE2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hist1h2acC0HKE2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h2acC0HKE2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hist1h2acC0HKE2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms