Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Gm12887B1AVM1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm12887B1AVM1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm12887B1AVM1 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Gm12887B1AVM1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.55□□□□□ -0.24
Gm12887B1AVM1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.55□□□□□ -0.24
Gm12887B1AVM1 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm12887B1AVM1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm12887B1AVM1 Gm11643-201ENSMUST00000119578 864 ntBASIC13.55□□□□□ -0.24
Gm12887B1AVM1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Gm12887B1AVM1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.55□□□□□ -0.24
Gm12887B1AVM1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Gm12887B1AVM1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.55□□□□□ -0.24
Gm12887B1AVM1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Gm12887B1AVM1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Gm12887B1AVM1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm12887B1AVM1 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm12887B1AVM1 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Gm12887B1AVM1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm12887B1AVM1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm12887B1AVM1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Gm12887B1AVM1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm12887B1AVM1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm12887B1AVM1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Gm12887B1AVM1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Gm12887B1AVM1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Gm12887B1AVM1 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm12887B1AVM1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm12887B1AVM1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm12887B1AVM1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm12887B1AVM1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gm12887B1AVM1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm12887B1AVM1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gm12887B1AVM1 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.54□□□□□ -0.24
Gm12887B1AVM1 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm12887B1AVM1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm12887B1AVM1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gm12887B1AVM1 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm12887B1AVM1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Gm12887B1AVM1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gm12887B1AVM1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gm12887B1AVM1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm12887B1AVM1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm12887B1AVM1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gm12887B1AVM1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm12887B1AVM1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm12887B1AVM1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.54□□□□□ -0.24
Gm12887B1AVM1 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.54□□□□□ -0.24
Gm12887B1AVM1 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gm12887B1AVM1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gm12887B1AVM1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.53□□□□□ -0.24
Gm12887B1AVM1 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.53□□□□□ -0.24
Gm12887B1AVM1 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Gm44549-201ENSMUST00000208351 577 ntBASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gm12887B1AVM1 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.52□□□□□ -0.24
Gm12887B1AVM1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Gm12887B1AVM1 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gm12887B1AVM1 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gm12887B1AVM1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gm12887B1AVM1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.52□□□□□ -0.25
Gm12887B1AVM1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gm12887B1AVM1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gm12887B1AVM1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Gm12887B1AVM1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gm12887B1AVM1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Gm12887B1AVM1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Gm12887B1AVM1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gm12887B1AVM1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
Gm12887B1AVM1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Gm12887B1AVM1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Gm12887B1AVM1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms