Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a5A6H584 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a5A6H584 Gm5784-201ENSMUST00000179344 2478 ntBASIC12.57□□□□□ -0.4
Col6a5A6H584 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a5A6H584 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.57□□□□□ -0.4
Col6a5A6H584 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.57□□□□□ -0.4
Col6a5A6H584 Gm44492-201ENSMUST00000197012 141 ntBASIC12.57□□□□□ -0.4
Col6a5A6H584 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.57□□□□□ -0.4
Col6a5A6H584 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.57□□□□□ -0.4
Col6a5A6H584 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a5A6H584 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a5A6H584 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a5A6H584 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.57□□□□□ -0.4
Col6a5A6H584 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Col6a5A6H584 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a5A6H584 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a5A6H584 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a5A6H584 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a5A6H584 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a5A6H584 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC12.56□□□□□ -0.4
Col6a5A6H584 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a5A6H584 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a5A6H584 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Col6a5A6H584 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a5A6H584 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.56□□□□□ -0.4
Col6a5A6H584 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.56□□□□□ -0.4
Col6a5A6H584 Gm27437-201ENSMUST00000183429 107 ntBASIC12.56□□□□□ -0.4
Col6a5A6H584 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a5A6H584 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a5A6H584 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.56□□□□□ -0.4
Col6a5A6H584 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Col6a5A6H584 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a5A6H584 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a5A6H584 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.56□□□□□ -0.4
Col6a5A6H584 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a5A6H584 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a5A6H584 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a5A6H584 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col6a5A6H584 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.56□□□□□ -0.4
Col6a5A6H584 Gm27622-201ENSMUST00000183779 60 ntBASIC12.56□□□□□ -0.4
Col6a5A6H584 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.56□□□□□ -0.4
Col6a5A6H584 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Col6a5A6H584 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a5A6H584 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a5A6H584 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a5A6H584 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a5A6H584 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a5A6H584 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC12.55□□□□□ -0.4
Col6a5A6H584 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC12.55□□□□□ -0.4
Col6a5A6H584 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.55□□□□□ -0.4
Col6a5A6H584 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a5A6H584 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a5A6H584 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC12.55□□□□□ -0.4
Col6a5A6H584 Gm22175-201ENSMUST00000175007 78 ntBASIC12.55□□□□□ -0.4
Col6a5A6H584 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Col6a5A6H584 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a5A6H584 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a5A6H584 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a5A6H584 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a5A6H584 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a5A6H584 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a5A6H584 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a5A6H584 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a5A6H584 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.55□□□□□ -0.4
Col6a5A6H584 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.55□□□□□ -0.4
Col6a5A6H584 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.55□□□□□ -0.4
Col6a5A6H584 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a5A6H584 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col6a5A6H584 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a5A6H584 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a5A6H584 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a5A6H584 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a5A6H584 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a5A6H584 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a5A6H584 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a5A6H584 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.54□□□□□ -0.4
Col6a5A6H584 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a5A6H584 Gm27301-201ENSMUST00000184012 127 ntBASIC12.54□□□□□ -0.4
Col6a5A6H584 Gm43630-201ENSMUST00000201550 776 ntBASIC12.54□□□□□ -0.4
Col6a5A6H584 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a5A6H584 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a5A6H584 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a5A6H584 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a5A6H584 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a5A6H584 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Col6a5A6H584 Gm4459-201ENSMUST00000118750 468 ntBASIC12.54□□□□□ -0.4
Col6a5A6H584 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.54□□□□□ -0.4
Col6a5A6H584 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.54□□□□□ -0.4
Col6a5A6H584 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a5A6H584 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a5A6H584 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col6a5A6H584 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a5A6H584 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.53□□□□□ -0.4
Col6a5A6H584 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.53□□□□□ -0.4
Col6a5A6H584 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a5A6H584 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col6a5A6H584 Mir449b-201ENSMUST00000104833 80 ntBASIC12.53□□□□□ -0.4
Col6a5A6H584 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col6a5A6H584 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col6a5A6H584 Idnk-204ENSMUST00000226010 1898 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms