Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Idnk-204ENSMUST00000226010 1898 ntBASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Gm44544-201ENSMUST00000207052 1844 ntBASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3n-3A0A0G2JEM0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC12.65□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC12.65□□□□□ -0.38
Trav3n-3A0A0G2JEM0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.65□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trav3n-3A0A0G2JEM0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.65□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav3n-3A0A0G2JEM0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3n-3A0A0G2JEM0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms