Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 AC093043.3-201ENSMUST00000226531 2273 ntBASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Igkv8-28A0A0G2JE47 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Gm37812-201ENSMUST00000195216 2475 ntBASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Gm45212-201ENSMUST00000205831 3403 ntBASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Tfap2a-209ENSMUST00000225180 1828 ntBASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Igkv8-28A0A0G2JE47 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv8-28A0A0G2JE47 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms