Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Gm2559-201ENSMUST00000201323 363 ntBASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Gm4968-201ENSMUST00000071458 858 ntBASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Gm15375-201ENSMUST00000119510 849 ntBASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.52□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC11.52□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Gm45560-201ENSMUST00000211492 1472 ntBASIC11.52□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-4-dv7A0A075B6C2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC11.52□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-4-dv7A0A075B6C2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms