Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Gm42642-201ENSMUST00000200683 355 ntBASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav6d-5A0A075B6B9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6d-5A0A075B6B9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Gm17661-201ENSMUST00000170317 270 ntBASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav6d-5A0A075B6B9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Trav6d-5A0A075B6B9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-5A0A075B6B9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-5A0A075B6B9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-5A0A075B6B9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-5A0A075B6B9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav6d-5A0A075B6B9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-5A0A075B6B9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav6d-5A0A075B6B9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-5A0A075B6B9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-5A0A075B6B9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6d-5A0A075B6B9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms