Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Gm18284-201ENSMUST00000172604 624 ntBASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.67□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.67□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Gm11249-201ENSMUST00000117071 859 ntBASIC13.67□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.67□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.67□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Gm12896-201ENSMUST00000118430 226 ntBASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Gm42545-201ENSMUST00000202755 922 ntBASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Gm18025-201ENSMUST00000221733 862 ntBASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav15-2-dv6-2A0A075B650 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms