Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Mir8112-201ENSMUST00000184382 131 ntBASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Gm21362-201ENSMUST00000194272 928 ntBASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Gm7370-201ENSMUST00000219471 767 ntBASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13d-1A0A075B606 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Gm7213-201ENSMUST00000215977 950 ntBASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13d-1A0A075B606 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13d-1A0A075B606 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms