Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 IGKV7-3-201ENST00000357453 298 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 RPL35AP24-201ENST00000413846 330 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 DPPA2P2-201ENST00000418220 897 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 REREP1Y-201ENST00000422655 198 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 FAM96AP1-201ENST00000430879 482 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 REREP2Y-201ENST00000439103 200 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AL133217.1-201ENST00000450980 425 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 MRPL42P4-201ENST00000453267 443 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 NECAP1P2-201ENST00000455668 727 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 RN7SL826P-201ENST00000479724 288 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 RN7SL727P-201ENST00000482164 296 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AC084024.2-201ENST00000503480 791 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AC006499.3-201ENST00000506077 748 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 SEPT10P1-201ENST00000517342 1162 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 PDCL2P2-201ENST00000533651 189 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AC122134.1-201ENST00000565664 1104 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 MTCYBP28-201ENST00000566728 1132 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 FKBP1AP1-201ENST00000594588 318 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AC010620.1-201ENST00000601088 1102 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AL022161.1-201ENST00000604390 213 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AP003392.5-201ENST00000607857 415 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 MIR7973-1-201ENST00000614683 76 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AC009090.3-201ENST00000616553 565 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AL513185.3-201ENST00000433335 1300 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 DDX18P5-201ENST00000534547 1306 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AC025470.1-201ENST00000510053 2032 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 AC138907.8-201ENST00000623981 2256 ntBASIC5.63□□□□□ -1.51
PCDHB1Q9Y5F3 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 AL121886.1-201ENST00000358609 435 ntBASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 RNA5SP30-201ENST00000365552 115 ntBASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 OR52E6-202ENST00000379946 954 ntBASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 SNORA11C-201ENST00000408532 129 ntBASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 RNU6-77P-201ENST00000410554 91 ntBASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 RAP1BP1-201ENST00000412709 553 ntBASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 MTND4P20-201ENST00000424125 869 ntBASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 RSL24D1P3-201ENST00000449255 495 ntBASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 DNAJC19P8-201ENST00000452887 259 ntBASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 AC011979.1-201ENST00000472300 483 ntBASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 RN7SL547P-201ENST00000490793 290 ntBASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 AC118282.2-201ENST00000508739 374 ntBASIC5.62□□□□□ -1.51
PCDHB1Q9Y5F3 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms