Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 AC092648.1-201ENST00000425870 423 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 RPL12P28-201ENST00000430852 489 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 USP9YP24-201ENST00000434374 697 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 PA2G4P6-201ENST00000438325 1197 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 MTCYBP31-201ENST00000438855 1122 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 ARAFP2-201ENST00000440565 559 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 CEACAMP7-201ENST00000444105 496 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 USP9YP17-201ENST00000444617 696 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 AC079168.1-201ENST00000458741 345 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 AC108161.1-201ENST00000461060 402 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 AC107398.1-201ENST00000486904 505 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 AC022133.1-201ENST00000490961 571 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 AC134050.1-201ENST00000495088 933 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 AP006245.2-201ENST00000522004 300 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 AC013701.1-201ENST00000522657 465 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 MTATP6P15-201ENST00000527233 835 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 AP003717.3-201ENST00000544832 1180 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 ZNF971P-201ENST00000562068 1249 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 MIR4700-201ENST00000578311 74 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 RBM22P1-201ENST00000578589 1214 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 PRPF19P1-201ENST00000584766 898 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 GAS5-AS1-201ENST00000602767 694 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 AC074101.1-201ENST00000637861 241 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 AC025574.1-201ENST00000554784 1653 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 AC006210.2-201ENST00000367074 1545 ntBASIC5.43□□□□□ -1.54
USP29Q9HBJ7 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USP29Q9HBJ7 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 RN7SKP153-201ENST00000365026 316 ntBASIC5.42□□□□□ -1.54
USP29Q9HBJ7 MIR589-201ENST00000385238 99 ntBASIC5.42□□□□□ -1.54
USP29Q9HBJ7 ATP5HP3-201ENST00000396994 486 ntBASIC5.42□□□□□ -1.54
USP29Q9HBJ7 MTND4P13-201ENST00000402078 1023 ntBASIC5.42□□□□□ -1.54
USP29Q9HBJ7 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 AL390774.1-201ENST00000411924 246 ntBASIC5.42□□□□□ -1.54
USP29Q9HBJ7 AC211486.3-201ENST00000412694 621 ntBASIC5.42□□□□□ -1.54
USP29Q9HBJ7 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 MTCO2P21-201ENST00000419780 677 ntBASIC5.42□□□□□ -1.54
USP29Q9HBJ7 AC023128.2-201ENST00000420880 1223 ntBASIC5.42□□□□□ -1.54
USP29Q9HBJ7 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 OR52B5P-201ENST00000435337 951 ntBASIC5.42□□□□□ -1.54
USP29Q9HBJ7 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 RPS11P7-201ENST00000442125 465 ntBASIC5.42□□□□□ -1.54
USP29Q9HBJ7 AC023512.1-201ENST00000444513 499 ntBASIC5.42□□□□□ -1.54
USP29Q9HBJ7 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 AC104634.1-201ENST00000452720 462 ntBASIC5.42□□□□□ -1.54
USP29Q9HBJ7 AC072052.1-201ENST00000496556 306 ntBASIC5.42□□□□□ -1.54
USP29Q9HBJ7 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 PGAM1P13-201ENST00000507497 754 ntBASIC5.42□□□□□ -1.54
USP29Q9HBJ7 BTG4P1-201ENST00000510421 183 ntBASIC5.42□□□□□ -1.54
USP29Q9HBJ7 AC005351.1-201ENST00000511152 786 ntBASIC5.42□□□□□ -1.54
USP29Q9HBJ7 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 AC126177.5-201ENST00000549599 178 ntBASIC5.42□□□□□ -1.54
USP29Q9HBJ7 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 AC022884.2-201ENST00000578535 580 ntBASIC5.42□□□□□ -1.54
USP29Q9HBJ7 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 AC005252.1-201ENST00000604518 1063 ntBASIC5.42□□□□□ -1.54
USP29Q9HBJ7 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 OR52B5P-202ENST00000641118 1110 ntBASIC5.42□□□□□ -1.54
USP29Q9HBJ7 AL132640.2-201ENST00000559968 1698 ntBASIC5.42□□□□□ -1.54
USP29Q9HBJ7 SMG1P7-201ENST00000565246 2704 ntBASIC5.42□□□□□ -1.54
USP29Q9HBJ7 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 AC023421.1-201ENST00000590535 1785 ntBASIC5.42□□□□□ -1.54
USP29Q9HBJ7 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP29Q9HBJ7 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP29Q9HBJ7 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms