Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 ENSAP3-201ENST00000312710 333 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 RNU6-543P-201ENST00000362576 108 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 SUGT1P2-201ENST00000379452 992 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 RNU6-1042P-201ENST00000384204 107 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 RNY3P10-201ENST00000384764 102 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 AC092642.1-201ENST00000392417 425 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 AC019050.1-201ENST00000418508 492 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 ISCA1P1-201ENST00000426679 387 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 VN1R54P-201ENST00000435210 1049 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 AC091862.1-201ENST00000438016 1100 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 USP9YP22-201ENST00000438971 294 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 TCEA1P3-201ENST00000443005 880 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 UBE2V1P7-201ENST00000446395 340 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 REG1CP-206ENST00000447469 496 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 AL591363.1-201ENST00000450091 483 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 CALM1P2-201ENST00000452941 448 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 HSPE1P22-201ENST00000456856 327 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 RNA5SP269-201ENST00000459032 137 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 RN7SL254P-201ENST00000460609 284 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 AL603882.1-201ENST00000463059 681 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 RPL5P24-201ENST00000463742 885 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 SNX18P24-201ENST00000505249 671 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 PRDX4P1-201ENST00000507189 574 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 ST13P12-201ENST00000508958 1094 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 TRIM51DP-201ENST00000529746 596 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 AC005832.3-201ENST00000537929 631 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 TPRKBP2-201ENST00000565969 475 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 AC004067.1-201ENST00000608733 700 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 AP005137.2-201ENST00000609238 400 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 AL136097.3-201ENST00000611097 505 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 AL031658.2-201ENST00000616850 651 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 AC093648.1-201ENST00000623546 606 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 CASC19-264ENST00000641912 1184 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 AC099063.3-201ENST00000642066 185 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 AC024651.2-201ENST00000562480 2098 ntBASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.28□□□□□ -1.4
FOXP3Q9BZS1 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 AL355834.1-201ENST00000556602 3965 ntBASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 RNU6-797P-201ENST00000363101 109 ntBASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 RNU1-49P-201ENST00000363468 159 ntBASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 AP000357.1-201ENST00000409926 1165 ntBASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 RN7SKP121-201ENST00000410842 305 ntBASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 AC245096.1-201ENST00000413104 546 ntBASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 RPL21P50-201ENST00000417698 477 ntBASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 PPIAP10-201ENST00000438675 458 ntBASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 AC093155.1-201ENST00000440164 826 ntBASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 AC015983.1-201ENST00000441577 373 ntBASIC6.27□□□□□ -1.41
FOXP3Q9BZS1 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms