Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC024940.4-201ENST00000605507 246 ntBASIC4.41□□□□□ -1.7
COL21A1Q96P44 FAM25E-202ENST00000608562 189 ntBASIC4.41□□□□□ -1.7
COL21A1Q96P44 AL359757.1-201ENST00000623176 255 ntBASIC4.41□□□□□ -1.7
COL21A1Q96P44 AC011815.3-201ENST00000624194 473 ntBASIC4.41□□□□□ -1.7
COL21A1Q96P44 AC055839.1-201ENST00000634467 498 ntBASIC4.41□□□□□ -1.7
COL21A1Q96P44 AL592182.3-201ENST00000642132 3304 ntBASIC4.41□□□□□ -1.7
COL21A1Q96P44 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.41□□□□□ -1.7
COL21A1Q96P44 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.41□□□□□ -1.7
COL21A1Q96P44 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL21A1Q96P44 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
COL21A1Q96P44 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
COL21A1Q96P44 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL21A1Q96P44 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL21A1Q96P44 AP001002.1-201ENST00000625148 1513 ntBASIC4.41□□□□□ -1.7
COL21A1Q96P44 AC007382.1-201ENST00000624376 2618 ntBASIC4.41□□□□□ -1.7
COL21A1Q96P44 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.4□□□□□ -1.7
COL21A1Q96P44 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
COL21A1Q96P44 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
COL21A1Q96P44 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.4□□□□□ -1.7
COL21A1Q96P44 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
COL21A1Q96P44 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
COL21A1Q96P44 AL606537.1-201ENST00000607258 2011 ntBASIC4.4□□□□□ -1.7
COL21A1Q96P44 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.4□□□□□ -1.7
COL21A1Q96P44 OR14L1P-202ENST00000641545 3009 ntBASIC4.4□□□□□ -1.71
COL21A1Q96P44 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
COL21A1Q96P44 RN7SKP103-201ENST00000363848 320 ntBASIC4.4□□□□□ -1.71
COL21A1Q96P44 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL21A1Q96P44 MIR585-201ENST00000384887 94 ntBASIC4.4□□□□□ -1.71
COL21A1Q96P44 MIR921-201ENST00000401133 56 ntBASIC4.4□□□□□ -1.71
COL21A1Q96P44 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.71
COL21A1Q96P44 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.4□□□□□ -1.71
COL21A1Q96P44 AC107015.1-201ENST00000466902 747 ntBASIC4.4□□□□□ -1.71
COL21A1Q96P44 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COL21A1Q96P44 RPL23AP65-201ENST00000475608 468 ntBASIC4.4□□□□□ -1.71
COL21A1Q96P44 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.4□□□□□ -1.71
COL21A1Q96P44 HIGD1AP5-201ENST00000529959 259 ntBASIC4.4□□□□□ -1.71
COL21A1Q96P44 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.4□□□□□ -1.71
COL21A1Q96P44 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
COL21A1Q96P44 GLRXP2-201ENST00000555594 321 ntBASIC4.4□□□□□ -1.71
COL21A1Q96P44 UBE2FP2-201ENST00000566646 462 ntBASIC4.4□□□□□ -1.71
COL21A1Q96P44 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.4□□□□□ -1.71
COL21A1Q96P44 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.4□□□□□ -1.71
COL21A1Q96P44 SLC25A36P1-201ENST00000590111 465 ntBASIC4.4□□□□□ -1.71
COL21A1Q96P44 AC010615.3-201ENST00000597319 394 ntBASIC4.4□□□□□ -1.71
COL21A1Q96P44 AL391358.1-201ENST00000605342 190 ntBASIC4.4□□□□□ -1.71
COL21A1Q96P44 AL008729.2-201ENST00000606393 473 ntBASIC4.4□□□□□ -1.71
COL21A1Q96P44 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.4□□□□□ -1.71
COL21A1Q96P44 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.4□□□□□ -1.71
COL21A1Q96P44 AP001784.1-201ENST00000624107 428 ntBASIC4.4□□□□□ -1.71
COL21A1Q96P44 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
COL21A1Q96P44 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL21A1Q96P44 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COL21A1Q96P44 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL21A1Q96P44 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COL21A1Q96P44 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COL21A1Q96P44 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.4□□□□□ -1.71
COL21A1Q96P44 AC017104.4-201ENST00000636283 1592 ntBASIC4.4□□□□□ -1.71
COL21A1Q96P44 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
COL21A1Q96P44 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL21A1Q96P44 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL21A1Q96P44 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
COL21A1Q96P44 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
COL21A1Q96P44 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
COL21A1Q96P44 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
COL21A1Q96P44 RN7SKP115-201ENST00000363177 317 ntBASIC4.39□□□□□ -1.71
COL21A1Q96P44 RNA5SP28-201ENST00000363841 119 ntBASIC4.39□□□□□ -1.71
COL21A1Q96P44 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.39□□□□□ -1.71
COL21A1Q96P44 OR13C3-201ENST00000374781 1108 ntBASIC4.39□□□□□ -1.71
COL21A1Q96P44 AL672167.2-201ENST00000377164 879 ntBASIC4.39□□□□□ -1.71
COL21A1Q96P44 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
COL21A1Q96P44 RNU1-82P-201ENST00000390851 165 ntBASIC4.39□□□□□ -1.71
COL21A1Q96P44 AL035419.1-201ENST00000397037 564 ntBASIC4.39□□□□□ -1.71
COL21A1Q96P44 RN7SKP100-201ENST00000411258 284 ntBASIC4.39□□□□□ -1.71
COL21A1Q96P44 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.39□□□□□ -1.71
COL21A1Q96P44 AC004074.1-201ENST00000421810 1063 ntBASIC4.39□□□□□ -1.71
COL21A1Q96P44 EIF4EP1-201ENST00000422311 642 ntBASIC4.39□□□□□ -1.71
COL21A1Q96P44 AL645608.4-201ENST00000423619 154 ntBASIC4.39□□□□□ -1.71
COL21A1Q96P44 AC006466.1-201ENST00000438721 289 ntBASIC4.39□□□□□ -1.71
COL21A1Q96P44 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.39□□□□□ -1.71
COL21A1Q96P44 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.39□□□□□ -1.71
COL21A1Q96P44 RPL35AP28-201ENST00000459730 331 ntBASIC4.39□□□□□ -1.71
COL21A1Q96P44 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
COL21A1Q96P44 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.39□□□□□ -1.71
COL21A1Q96P44 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.39□□□□□ -1.71
COL21A1Q96P44 RN7SKP276-201ENST00000516242 268 ntBASIC4.39□□□□□ -1.71
COL21A1Q96P44 SOX5P1-201ENST00000524155 1127 ntBASIC4.39□□□□□ -1.71
COL21A1Q96P44 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
COL21A1Q96P44 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.39□□□□□ -1.71
COL21A1Q96P44 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.39□□□□□ -1.71
COL21A1Q96P44 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.39□□□□□ -1.71
COL21A1Q96P44 AC091042.1-201ENST00000579213 173 ntBASIC4.39□□□□□ -1.71
COL21A1Q96P44 SNORD39.2-201ENST00000579995 76 ntBASIC4.39□□□□□ -1.71
COL21A1Q96P44 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
COL21A1Q96P44 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.39□□□□□ -1.71
COL21A1Q96P44 AC005520.3-201ENST00000602874 370 ntBASIC4.39□□□□□ -1.71
COL21A1Q96P44 RPL26P30-202ENST00000602923 645 ntBASIC4.39□□□□□ -1.71
COL21A1Q96P44 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.39□□□□□ -1.71
COL21A1Q96P44 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.39□□□□□ -1.71
COL21A1Q96P44 AC116651.1-201ENST00000609724 556 ntBASIC4.39□□□□□ -1.71
COL21A1Q96P44 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms