Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS50Q96JG6 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VPS50Q96JG6 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
VPS50Q96JG6 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS50Q96JG6 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS50Q96JG6 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS50Q96JG6 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS50Q96JG6 AL731566.1-201ENST00000620490 1937 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS50Q96JG6 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS50Q96JG6 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.35□□□□□ -1.55
VPS50Q96JG6 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
VPS50Q96JG6 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS50Q96JG6 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS50Q96JG6 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS50Q96JG6 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 AL121886.1-201ENST00000358609 435 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 RNA5SP319-201ENST00000362768 119 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 RN7SKP124-201ENST00000364730 341 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS50Q96JG6 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
VPS50Q96JG6 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS50Q96JG6 AC096921.1-201ENST00000411661 375 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 AP000534.2-201ENST00000412729 568 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS50Q96JG6 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS50Q96JG6 NPM1P33-201ENST00000438918 872 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 AP000281.1-201ENST00000444036 316 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS50Q96JG6 VN1R40P-201ENST00000455196 941 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 RNA5SP103-201ENST00000459503 118 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS50Q96JG6 RPS23P6-201ENST00000466136 431 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 AL157777.1-201ENST00000468100 304 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 RN7SL51P-201ENST00000468230 285 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 RPL32P33-201ENST00000487023 394 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 RPS4XP14-201ENST00000493072 781 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 AC009120.1-201ENST00000493458 473 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 AC108693.1-201ENST00000496068 432 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 RPS17P5-201ENST00000498293 408 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.35□□□□□ -1.55
VPS50Q96JG6 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS50Q96JG6 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS50Q96JG6 IGKV2-18-201ENST00000522607 343 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS50Q96JG6 AC104417.1-201ENST00000523974 751 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS50Q96JG6 LRRC6P1-201ENST00000532188 885 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
VPS50Q96JG6 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS50Q96JG6 MRPS36P5-201ENST00000551909 298 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 NMNAT1P5-201ENST00000559657 841 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 AC127024.5-201ENST00000580085 462 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS50Q96JG6 PCNAP1-202ENST00000595299 752 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 AL137072.1-201ENST00000603444 466 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 AC092954.1-201ENST00000609121 445 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS50Q96JG6 AC096586.1-201ENST00000610267 561 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 AC079395.2-201ENST00000610982 737 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 AL356274.1-201ENST00000617064 410 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 AP003485.2-201ENST00000623636 610 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS50Q96JG6 BX649567.1-201ENST00000642071 1134 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS50Q96JG6 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS50Q96JG6 AC104623.2-202ENST00000623477 4002 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS50Q96JG6 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS50Q96JG6 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.35□□□□□ -1.55
VPS50Q96JG6 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS50Q96JG6 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS50Q96JG6 ADAM5-202ENST00000399789 1942 ntBASIC5.35□□□□□ -1.55
VPS50Q96JG6 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS50Q96JG6 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS50Q96JG6 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS50Q96JG6 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
VPS50Q96JG6 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
VPS50Q96JG6 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
VPS50Q96JG6 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.34□□□□□ -1.55
VPS50Q96JG6 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS50Q96JG6 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS50Q96JG6 RNA5SP326-201ENST00000363209 110 ntBASIC5.34□□□□□ -1.55
VPS50Q96JG6 RNU4-68P-201ENST00000364314 141 ntBASIC5.34□□□□□ -1.55
VPS50Q96JG6 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
VPS50Q96JG6 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS50Q96JG6 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS50Q96JG6 MIR551A-201ENST00000385042 96 ntBASIC5.34□□□□□ -1.55
VPS50Q96JG6 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
VPS50Q96JG6 AL357752.1-201ENST00000412817 349 ntBASIC5.34□□□□□ -1.55
VPS50Q96JG6 BTF3P8-201ENST00000414577 526 ntBASIC5.34□□□□□ -1.55
VPS50Q96JG6 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS50Q96JG6 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.34□□□□□ -1.55
VPS50Q96JG6 AC010099.3-201ENST00000423896 409 ntBASIC5.34□□□□□ -1.55
VPS50Q96JG6 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.34□□□□□ -1.55
VPS50Q96JG6 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS50Q96JG6 RPL23AP4-201ENST00000427757 463 ntBASIC5.34□□□□□ -1.55
VPS50Q96JG6 TMEM183AP1-205ENST00000432739 290 ntBASIC5.34□□□□□ -1.55
VPS50Q96JG6 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.34□□□□□ -1.55
VPS50Q96JG6 YWHAZP2-201ENST00000440317 728 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms