Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5□□□□□ -1.61
VMP1Q96GC9 PABPC1P6-201ENST00000445594 1829 ntBASIC5□□□□□ -1.61
VMP1Q96GC9 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
VMP1Q96GC9 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5□□□□□ -1.61
VMP1Q96GC9 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5□□□□□ -1.61
VMP1Q96GC9 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VMP1Q96GC9 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5□□□□□ -1.61
VMP1Q96GC9 RNU1-149P-201ENST00000390870 161 ntBASIC5□□□□□ -1.61
VMP1Q96GC9 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
VMP1Q96GC9 DBIP1-201ENST00000401435 260 ntBASIC5□□□□□ -1.61
VMP1Q96GC9 HSPA8P15-201ENST00000401676 786 ntBASIC5□□□□□ -1.61
VMP1Q96GC9 AL356057.1-202ENST00000402263 756 ntBASIC5□□□□□ -1.61
VMP1Q96GC9 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5□□□□□ -1.61
VMP1Q96GC9 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5□□□□□ -1.61
VMP1Q96GC9 RNU2-17P-201ENST00000410290 190 ntBASIC5□□□□□ -1.61
VMP1Q96GC9 AC007738.1-201ENST00000413892 348 ntBASIC5□□□□□ -1.61
VMP1Q96GC9 XKRYP4-201ENST00000414395 483 ntBASIC5□□□□□ -1.61
VMP1Q96GC9 PCNPP4-201ENST00000414817 517 ntBASIC5□□□□□ -1.61
VMP1Q96GC9 TCEA1P4-201ENST00000415066 844 ntBASIC5□□□□□ -1.61
VMP1Q96GC9 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5□□□□□ -1.61
VMP1Q96GC9 FTH1P16-201ENST00000435241 552 ntBASIC5□□□□□ -1.61
VMP1Q96GC9 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5□□□□□ -1.61
VMP1Q96GC9 RPS15AP29-201ENST00000445539 400 ntBASIC5□□□□□ -1.61
VMP1Q96GC9 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5□□□□□ -1.61
VMP1Q96GC9 MTND2P25-201ENST00000449028 610 ntBASIC5□□□□□ -1.61
VMP1Q96GC9 XKRYP5-201ENST00000449659 483 ntBASIC5□□□□□ -1.61
VMP1Q96GC9 AL591473.1-201ENST00000464297 313 ntBASIC5□□□□□ -1.61
VMP1Q96GC9 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5□□□□□ -1.61
VMP1Q96GC9 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5□□□□□ -1.61
VMP1Q96GC9 RPS4XP1-201ENST00000482189 787 ntBASIC5□□□□□ -1.61
VMP1Q96GC9 UBA52P7-201ENST00000486088 380 ntBASIC5□□□□□ -1.61
VMP1Q96GC9 PGAM1P13-201ENST00000507497 754 ntBASIC5□□□□□ -1.61
VMP1Q96GC9 HMGB3P13-201ENST00000511263 607 ntBASIC5□□□□□ -1.61
VMP1Q96GC9 AC138938.1-201ENST00000515431 782 ntBASIC5□□□□□ -1.61
VMP1Q96GC9 RNA5SP34-201ENST00000516887 130 ntBASIC5□□□□□ -1.61
VMP1Q96GC9 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5□□□□□ -1.61
VMP1Q96GC9 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5□□□□□ -1.61
VMP1Q96GC9 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5□□□□□ -1.61
VMP1Q96GC9 MIR1269B-201ENST00000580405 75 ntBASIC5□□□□□ -1.61
VMP1Q96GC9 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5□□□□□ -1.61
VMP1Q96GC9 PCNAP1-202ENST00000595299 752 ntBASIC5□□□□□ -1.61
VMP1Q96GC9 AP000769.2-201ENST00000602344 396 ntBASIC5□□□□□ -1.61
VMP1Q96GC9 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5□□□□□ -1.61
VMP1Q96GC9 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5□□□□□ -1.61
VMP1Q96GC9 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5□□□□□ -1.61
VMP1Q96GC9 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5□□□□□ -1.61
VMP1Q96GC9 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
VMP1Q96GC9 AL139811.1-201ENST00000424779 2299 ntBASIC5□□□□□ -1.61
VMP1Q96GC9 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5□□□□□ -1.61
VMP1Q96GC9 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5□□□□□ -1.61
VMP1Q96GC9 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
VMP1Q96GC9 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VMP1Q96GC9 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VMP1Q96GC9 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VMP1Q96GC9 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 AL590763.1-201ENST00000398297 1545 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 MIR223-201ENST00000385204 110 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 PPIAP9-201ENST00000403866 498 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VMP1Q96GC9 Z68694.1-201ENST00000413929 841 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 AC234782.4-201ENST00000417646 1048 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 BX510359.3-201ENST00000422168 306 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 AC108075.1-201ENST00000424692 529 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 AC093655.2-201ENST00000425735 631 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 AL031736.2-201ENST00000426573 787 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VMP1Q96GC9 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 AL691517.1-201ENST00000440833 1235 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 AC097499.1-201ENST00000444277 208 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 AC092685.1-201ENST00000447960 1243 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 RN7SL172P-201ENST00000460535 303 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 AL161747.1-201ENST00000480068 358 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 RPL7P40-201ENST00000481703 745 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VMP1Q96GC9 RPL30P11-201ENST00000495304 339 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 OR4A2P-201ENST00000527276 913 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 OR8G3P-201ENST00000533406 921 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 AC025260.1-201ENST00000548858 430 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 RPL10P14-201ENST00000565265 298 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 MIR4458-201ENST00000578872 75 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.99□□□□□ -1.61
VMP1Q96GC9 AC087283.1-201ENST00000604029 1074 ntBASIC4.99□□□□□ -1.61
VMP1Q96GC9 AC018618.2-201ENST00000604770 446 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms