Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 LYPLA1P3-201ENST00000402650 695 ntBASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 HDGFP1-201ENST00000405943 252 ntBASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AC004448.2-201ENST00000422360 586 ntBASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 PDSS1P1-201ENST00000422953 1114 ntBASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 RPL12P34-201ENST00000424532 479 ntBASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AL445528.1-201ENST00000426330 420 ntBASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 ELOCP10-201ENST00000440624 327 ntBASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AL627224.1-201ENST00000448334 444 ntBASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AC089999.1-201ENST00000460336 374 ntBASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AC090543.1-201ENST00000492168 485 ntBASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AC034244.2-201ENST00000514668 858 ntBASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 RN7SKP70-201ENST00000516655 271 ntBASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AC134698.5-201ENST00000519444 336 ntBASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 MIR4271-201ENST00000582451 67 ntBASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 ELOCP34-201ENST00000604436 327 ntBASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AL499605.1-201ENST00000604628 403 ntBASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 MIR6889-201ENST00000613185 59 ntBASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 MIR6071-201ENST00000616741 78 ntBASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AC005840.5-201ENST00000619166 599 ntBASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AC079298.2-201ENST00000623885 459 ntBASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AL592437.2-201ENST00000421655 2434 ntBASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 USP9YP4-201ENST00000424401 1745 ntBASIC4.01□□□□□ -1.77
CCDC71LQ8N9Z2 AP001002.1-201ENST00000625148 1513 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 SNORA17.1-201ENST00000362945 126 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 RNU1-20P-201ENST00000363314 162 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 RNA5SP510-201ENST00000364697 99 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 RN7SKP187-201ENST00000365536 330 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 OR7E156P-201ENST00000400303 464 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 Z97832.1-201ENST00000402490 328 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 RNA5SP146-201ENST00000410743 123 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 RPA2P2-201ENST00000419698 796 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 OR2AM1P-201ENST00000422137 422 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AL590623.1-201ENST00000427864 105 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 RPL12P28-201ENST00000430852 489 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 TDGF1P1-201ENST00000445734 527 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 KNOP1P3-201ENST00000446933 426 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 MYO5BP2-201ENST00000449815 1277 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AC009127.1-201ENST00000467090 155 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 S100A11P1-201ENST00000477525 312 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AC116562.1-201ENST00000485355 781 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 CDH12P2-201ENST00000504393 298 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 MTND2P31-201ENST00000512602 616 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 HIGD1AP18-201ENST00000520730 278 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 OR8X1P-201ENST00000534542 869 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AC022404.1-201ENST00000555320 273 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 HMGB2P1-201ENST00000591146 634 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AC130352.1-201ENST00000602979 661 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AC095055.1-201ENST00000603472 1113 ntBASIC4□□□□□ -1.77
CCDC71LQ8N9Z2 AC104695.2-201ENST00000605056 775 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms