Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 MIR3653-201ENST00000625572 110 ntBASIC6.82□□□□□ -1.32
VPS8Q8N3P4 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
VPS8Q8N3P4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.82□□□□□ -1.32
VPS8Q8N3P4 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
VPS8Q8N3P4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
VPS8Q8N3P4 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VPS8Q8N3P4 AP005435.3-201ENST00000531260 3198 ntBASIC6.81□□□□□ -1.32
VPS8Q8N3P4 AL513548.1-201ENST00000562904 1724 ntBASIC6.81□□□□□ -1.32
VPS8Q8N3P4 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.81□□□□□ -1.32
VPS8Q8N3P4 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.81□□□□□ -1.32
VPS8Q8N3P4 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
VPS8Q8N3P4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VPS8Q8N3P4 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC6.81□□□□□ -1.32
VPS8Q8N3P4 RN7SKP235-201ENST00000410662 305 ntBASIC6.81□□□□□ -1.32
VPS8Q8N3P4 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VPS8Q8N3P4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC6.81□□□□□ -1.32
VPS8Q8N3P4 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.81□□□□□ -1.32
VPS8Q8N3P4 EEF1A1P1-201ENST00000447052 739 ntBASIC6.81□□□□□ -1.32
VPS8Q8N3P4 RPL35AP15-201ENST00000468042 339 ntBASIC6.81□□□□□ -1.32
VPS8Q8N3P4 RPL23AP65-201ENST00000475608 468 ntBASIC6.81□□□□□ -1.32
VPS8Q8N3P4 STRADBP1-201ENST00000478954 1281 ntBASIC6.81□□□□□ -1.32
VPS8Q8N3P4 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.81□□□□□ -1.32
VPS8Q8N3P4 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.81□□□□□ -1.32
VPS8Q8N3P4 RNA5SP519-201ENST00000516480 119 ntBASIC6.81□□□□□ -1.32
VPS8Q8N3P4 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC6.81□□□□□ -1.32
VPS8Q8N3P4 AP003730.1-201ENST00000524605 285 ntBASIC6.81□□□□□ -1.32
VPS8Q8N3P4 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.81□□□□□ -1.32
VPS8Q8N3P4 CYCSP29-201ENST00000533731 318 ntBASIC6.81□□□□□ -1.32
VPS8Q8N3P4 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
VPS8Q8N3P4 AL109766.1-201ENST00000555080 552 ntBASIC6.81□□□□□ -1.32
VPS8Q8N3P4 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC6.81□□□□□ -1.32
VPS8Q8N3P4 AL021997.2-201ENST00000615674 271 ntBASIC6.81□□□□□ -1.32
VPS8Q8N3P4 MIR7151-201ENST00000617477 60 ntBASIC6.81□□□□□ -1.32
VPS8Q8N3P4 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
VPS8Q8N3P4 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VPS8Q8N3P4 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.81□□□□□ -1.32
VPS8Q8N3P4 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
VPS8Q8N3P4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VPS8Q8N3P4 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC6.81□□□□□ -1.32
VPS8Q8N3P4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VPS8Q8N3P4 LARP1BP1-201ENST00000506036 1359 ntBASIC6.8□□□□□ -1.32
VPS8Q8N3P4 RNA5SP22-201ENST00000365393 109 ntBASIC6.8□□□□□ -1.32
VPS8Q8N3P4 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.8□□□□□ -1.32
VPS8Q8N3P4 RNA5SP103-201ENST00000459503 118 ntBASIC6.8□□□□□ -1.32
VPS8Q8N3P4 AC010618.1-201ENST00000469924 477 ntBASIC6.8□□□□□ -1.32
VPS8Q8N3P4 AC103987.1-201ENST00000473394 348 ntBASIC6.8□□□□□ -1.32
VPS8Q8N3P4 AC108022.1-201ENST00000493466 478 ntBASIC6.8□□□□□ -1.32
VPS8Q8N3P4 IGBP1P5-201ENST00000507524 1000 ntBASIC6.8□□□□□ -1.32
VPS8Q8N3P4 RNA5SP49-201ENST00000516450 115 ntBASIC6.8□□□□□ -1.32
VPS8Q8N3P4 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.8□□□□□ -1.32
VPS8Q8N3P4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC6.8□□□□□ -1.32
VPS8Q8N3P4 AL352979.3-201ENST00000553515 247 ntBASIC6.8□□□□□ -1.32
VPS8Q8N3P4 AC025175.1-201ENST00000606482 759 ntBASIC6.8□□□□□ -1.32
VPS8Q8N3P4 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC6.8□□□□□ -1.32
VPS8Q8N3P4 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
VPS8Q8N3P4 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VPS8Q8N3P4 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VPS8Q8N3P4 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VPS8Q8N3P4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VPS8Q8N3P4 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VPS8Q8N3P4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
VPS8Q8N3P4 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VPS8Q8N3P4 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC6.79□□□□□ -1.32
VPS8Q8N3P4 AC112198.2-201ENST00000426589 6996 ntBASIC6.79□□□□□ -1.32
VPS8Q8N3P4 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
VPS8Q8N3P4 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VPS8Q8N3P4 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.79□□□□□ -1.32
VPS8Q8N3P4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC6.79□□□□□ -1.32
VPS8Q8N3P4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC6.79□□□□□ -1.32
VPS8Q8N3P4 RPS27AP13-201ENST00000498403 237 ntBASIC6.79□□□□□ -1.32
VPS8Q8N3P4 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.79□□□□□ -1.32
VPS8Q8N3P4 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.79□□□□□ -1.32
VPS8Q8N3P4 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC6.79□□□□□ -1.32
VPS8Q8N3P4 MIR4675-201ENST00000577898 77 ntBASIC6.79□□□□□ -1.32
VPS8Q8N3P4 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.79□□□□□ -1.32
VPS8Q8N3P4 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
VPS8Q8N3P4 MFSD8-242ENST00000641690 4199 ntBASIC6.79□□□□□ -1.32
VPS8Q8N3P4 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.79□□□□□ -1.32
VPS8Q8N3P4 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VPS8Q8N3P4 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
VPS8Q8N3P4 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
VPS8Q8N3P4 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
VPS8Q8N3P4 RPL23AP25-201ENST00000430973 463 ntBASIC6.78□□□□□ -1.32
VPS8Q8N3P4 SERPINA7P1-201ENST00000443077 631 ntBASIC6.78□□□□□ -1.32
VPS8Q8N3P4 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC6.78□□□□□ -1.32
VPS8Q8N3P4 RPL7P19-201ENST00000469948 618 ntBASIC6.78□□□□□ -1.32
VPS8Q8N3P4 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.78□□□□□ -1.32
VPS8Q8N3P4 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC6.78□□□□□ -1.32
VPS8Q8N3P4 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.78□□□□□ -1.32
VPS8Q8N3P4 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.78□□□□□ -1.32
VPS8Q8N3P4 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC6.78□□□□□ -1.32
VPS8Q8N3P4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC6.78□□□□□ -1.32
VPS8Q8N3P4 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
VPS8Q8N3P4 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
VPS8Q8N3P4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
VPS8Q8N3P4 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
VPS8Q8N3P4 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.32
VPS8Q8N3P4 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
VPS8Q8N3P4 RPS27AP11-201ENST00000402798 447 ntBASIC6.77□□□□□ -1.33
VPS8Q8N3P4 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms