Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC068790.2-201ENST00000602601 557 ntBASIC6.24□□□□□ -1.41
SYNE4Q8N205 AC069304.3-201ENST00000603938 1084 ntBASIC6.24□□□□□ -1.41
SYNE4Q8N205 AC019193.2-201ENST00000610012 634 ntBASIC6.24□□□□□ -1.41
SYNE4Q8N205 AC007786.3-201ENST00000615154 596 ntBASIC6.24□□□□□ -1.41
SYNE4Q8N205 AC026585.1-201ENST00000619582 524 ntBASIC6.24□□□□□ -1.41
SYNE4Q8N205 AC011330.2-201ENST00000621680 635 ntBASIC6.24□□□□□ -1.41
SYNE4Q8N205 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SYNE4Q8N205 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SYNE4Q8N205 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
SYNE4Q8N205 BCORP1-203ENST00000513194 5093 ntBASIC6.24□□□□□ -1.41
SYNE4Q8N205 ZNF652P1-201ENST00000442420 1309 ntBASIC6.24□□□□□ -1.41
SYNE4Q8N205 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
SYNE4Q8N205 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SYNE4Q8N205 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
SYNE4Q8N205 MTND4P5-201ENST00000435821 1374 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.23□□□□□ -1.41
SYNE4Q8N205 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 RNU5E-10P-201ENST00000363506 118 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 RNA5SP223-201ENST00000365174 120 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.23□□□□□ -1.41
SYNE4Q8N205 RN7SKP100-201ENST00000411258 284 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.23□□□□□ -1.41
SYNE4Q8N205 USP9YP21-201ENST00000420603 432 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 MTND4P24-201ENST00000424002 397 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC6.23□□□□□ -1.41
SYNE4Q8N205 MTCO1P51-201ENST00000427672 1060 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 CNOT7P1-201ENST00000429006 852 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 UBE2V1P1-201ENST00000430836 445 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 RPS29P9-201ENST00000440360 171 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 RPL7AP61-201ENST00000443410 636 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 MED28P3-201ENST00000444288 531 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 AC010326.1-201ENST00000462726 602 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 RPL12P20-201ENST00000475538 479 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 MTCO3P35-201ENST00000485582 781 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 SNORA76.2-201ENST00000517095 137 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 RN7SKP92-201ENST00000517266 244 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
SYNE4Q8N205 UBTFL9-201ENST00000534504 1148 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 AC007834.2-201ENST00000536310 343 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 OSBPL9P5-201ENST00000542581 171 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 AL442163.2-201ENST00000553912 710 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC6.23□□□□□ -1.41
SYNE4Q8N205 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.23□□□□□ -1.41
SYNE4Q8N205 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC6.23□□□□□ -1.41
SYNE4Q8N205 AC011492.1-201ENST00000600023 315 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC6.23□□□□□ -1.41
SYNE4Q8N205 AL512782.1-201ENST00000603093 364 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 RPP40P2-201ENST00000603596 712 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 AL049844.2-201ENST00000604280 628 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 AP003499.2-201ENST00000624100 483 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 AC018628.1-201ENST00000624147 3819 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 AC098679.4-201ENST00000624241 654 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.23□□□□□ -1.41
SYNE4Q8N205 AL121594.5-201ENST00000631724 573 ntBASIC6.23□□□□□ -1.41
SYNE4Q8N205 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SYNE4Q8N205 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
SYNE4Q8N205 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
SYNE4Q8N205 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SYNE4Q8N205 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SYNE4Q8N205 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SYNE4Q8N205 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SYNE4Q8N205 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SYNE4Q8N205 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SYNE4Q8N205 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.23□□□□□ -1.41
SYNE4Q8N205 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.23□□□□□ -1.41
SYNE4Q8N205 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SYNE4Q8N205 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SYNE4Q8N205 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.22□□□□□ -1.41
SYNE4Q8N205 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SYNE4Q8N205 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.22□□□□□ -1.41
SYNE4Q8N205 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.22□□□□□ -1.41
SYNE4Q8N205 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC6.22□□□□□ -1.41
SYNE4Q8N205 RNU6-697P-201ENST00000363348 107 ntBASIC6.22□□□□□ -1.41
SYNE4Q8N205 SNORD51.1-201ENST00000365405 77 ntBASIC6.22□□□□□ -1.41
SYNE4Q8N205 OR1L6-202ENST00000373684 1044 ntBASIC6.22□□□□□ -1.41
SYNE4Q8N205 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SYNE4Q8N205 CASP3-203ENST00000393588 677 ntTSL 4 BASIC6.22□□□□□ -1.41
SYNE4Q8N205 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SYNE4Q8N205 MORF4L1P6-201ENST00000418771 268 ntBASIC6.22□□□□□ -1.41
SYNE4Q8N205 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.22□□□□□ -1.41
SYNE4Q8N205 MTND2P40-201ENST00000436718 841 ntBASIC6.22□□□□□ -1.41
SYNE4Q8N205 RAB9AP5-201ENST00000437794 597 ntBASIC6.22□□□□□ -1.41
SYNE4Q8N205 AL450023.3-201ENST00000440592 271 ntBASIC6.22□□□□□ -1.41
SYNE4Q8N205 XKRY2-201ENST00000442362 1093 ntBASIC6.22□□□□□ -1.41
SYNE4Q8N205 MTCO2P3-201ENST00000442543 421 ntBASIC6.22□□□□□ -1.41
SYNE4Q8N205 RAB9AP2-201ENST00000443911 597 ntBASIC6.22□□□□□ -1.41
SYNE4Q8N205 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC6.22□□□□□ -1.41
SYNE4Q8N205 BX842559.2-201ENST00000451418 605 ntBASIC6.22□□□□□ -1.41
SYNE4Q8N205 ART2BP-201ENST00000453501 499 ntBASIC6.22□□□□□ -1.41
SYNE4Q8N205 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC6.22□□□□□ -1.41
SYNE4Q8N205 AC116562.1-201ENST00000485355 781 ntBASIC6.22□□□□□ -1.41
SYNE4Q8N205 AC090543.1-201ENST00000492168 485 ntBASIC6.22□□□□□ -1.41
SYNE4Q8N205 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms