Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC105429.2-201ENST00000610567 517 ntBASIC8□□□□□ -1.13
RC3H1Q5TC82 MIR6809-201ENST00000612189 116 ntBASIC8□□□□□ -1.13
RC3H1Q5TC82 AP001506.1-201ENST00000615444 211 ntBASIC8□□□□□ -1.13
RC3H1Q5TC82 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC8□□□□□ -1.13
RC3H1Q5TC82 AC021106.3-201ENST00000623925 531 ntBASIC8□□□□□ -1.13
RC3H1Q5TC82 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RC3H1Q5TC82 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RC3H1Q5TC82 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
RC3H1Q5TC82 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC8□□□□□ -1.13
RC3H1Q5TC82 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC8□□□□□ -1.13
RC3H1Q5TC82 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC8□□□□□ -1.13
RC3H1Q5TC82 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC8□□□□□ -1.13
RC3H1Q5TC82 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RC3H1Q5TC82 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC8□□□□□ -1.13
RC3H1Q5TC82 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC8□□□□□ -1.13
RC3H1Q5TC82 AC007342.7-201ENST00000624610 2337 ntBASIC8□□□□□ -1.13
RC3H1Q5TC82 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 AC005839.1-201ENST00000624148 3213 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 AC132825.1-201ENST00000463573 2247 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 AC010624.4-201ENST00000597606 1351 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 MTND5P3-201ENST00000438536 1800 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 TMSB4XP2-201ENST00000335179 210 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 RNU6-1318P-201ENST00000365389 103 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 OR4K12P-201ENST00000406538 961 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 U3.43-201ENST00000410734 213 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 BRK1P2-201ENST00000442875 223 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 YWHAQP9-201ENST00000445891 512 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 AL445665.1-202ENST00000452436 324 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 RPS26P39-201ENST00000469206 341 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 AC087312.1-201ENST00000471411 480 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 NPM1P27-201ENST00000502784 830 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 AC008945.1-201ENST00000505144 499 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 SSX6-203ENST00000509958 336 ntTSL 3 BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 MTCO1P30-201ENST00000515244 580 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 RNU6-123P-201ENST00000516163 102 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 OSBPL9P2-201ENST00000526582 1228 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 AC007424.1-203ENST00000554613 687 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 AC037471.2-201ENST00000564941 598 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 AC107954.1-201ENST00000565906 727 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 AL355375.2-201ENST00000574825 175 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 AC011712.1-201ENST00000588959 234 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 AC136443.5-201ENST00000603741 370 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 MIR7159-201ENST00000620587 66 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 AL136228.1-201ENST00000622221 319 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 MAPK10-377ENST00000642006 2752 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 AC241584.2-201ENST00000637142 2090 ntBASIC7.99□□□□□ -1.13
RC3H1Q5TC82 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RC3H1Q5TC82 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 AF131215.2-201ENST00000531549 1710 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 AF287957.1-201ENST00000607368 1595 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 Y_RNA.67-201ENST00000362870 100 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 Y_RNA.145-201ENST00000363527 102 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 SNORD65-201ENST00000391079 73 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 SNRPEP2-201ENST00000397592 279 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 AL023284.3-201ENST00000407767 334 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 RAB28P1-201ENST00000411517 641 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 PDCL2P1-201ENST00000419302 352 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC7.98□□□□□ -1.13
RC3H1Q5TC82 AL139156.3-201ENST00000454802 394 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 snoU109.1-201ENST00000459339 135 ntBASIC7.98□□□□□ -1.13
RC3H1Q5TC82 RPS20P4-201ENST00000461659 355 ntBASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms