Protein–RNA interactions for Protein: Q16656

NRF1, Nuclear respiratory factor 1, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRF1Q16656 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
NRF1Q16656 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NRF1Q16656 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NRF1Q16656 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NRF1Q16656 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.43□□□□□ -1.7
NRF1Q16656 AL121950.1-201ENST00000624993 2077 ntBASIC4.43□□□□□ -1.7
NRF1Q16656 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NRF1Q16656 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NRF1Q16656 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NRF1Q16656 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NRF1Q16656 GSTM3P2-201ENST00000412746 530 ntBASIC4.43□□□□□ -1.7
NRF1Q16656 GJA6P-201ENST00000415117 1042 ntBASIC4.43□□□□□ -1.7
NRF1Q16656 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.43□□□□□ -1.7
NRF1Q16656 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NRF1Q16656 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.43□□□□□ -1.7
NRF1Q16656 RPS17P8-201ENST00000434525 335 ntBASIC4.43□□□□□ -1.7
NRF1Q16656 RPL7P11-201ENST00000437586 658 ntBASIC4.43□□□□□ -1.7
NRF1Q16656 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.43□□□□□ -1.7
NRF1Q16656 PA2G4P6-201ENST00000438325 1197 ntBASIC4.43□□□□□ -1.7
NRF1Q16656 AC010469.1-201ENST00000463864 576 ntBASIC4.43□□□□□ -1.7
NRF1Q16656 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.43□□□□□ -1.7
NRF1Q16656 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.43□□□□□ -1.7
NRF1Q16656 RNA5SP228-201ENST00000516232 133 ntBASIC4.43□□□□□ -1.7
NRF1Q16656 AC005000.1-201ENST00000536192 288 ntBASIC4.43□□□□□ -1.7
NRF1Q16656 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.43□□□□□ -1.7
NRF1Q16656 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.43□□□□□ -1.7
NRF1Q16656 AC093249.4-201ENST00000564755 259 ntBASIC4.43□□□□□ -1.7
NRF1Q16656 AC138473.1-201ENST00000605717 526 ntBASIC4.43□□□□□ -1.7
NRF1Q16656 AC015813.4-201ENST00000610469 179 ntBASIC4.43□□□□□ -1.7
NRF1Q16656 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.43□□□□□ -1.7
NRF1Q16656 CR381572.2-201ENST00000624852 397 ntBASIC4.43□□□□□ -1.7
NRF1Q16656 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.43□□□□□ -1.7
NRF1Q16656 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NRF1Q16656 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NRF1Q16656 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
NRF1Q16656 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.43□□□□□ -1.7
NRF1Q16656 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.43□□□□□ -1.7
NRF1Q16656 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
NRF1Q16656 AC016588.2-201ENST00000632484 3021 ntBASIC4.43□□□□□ -1.7
NRF1Q16656 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NRF1Q16656 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
NRF1Q16656 RNA5SP52-201ENST00000362448 134 ntBASIC4.42□□□□□ -1.7
NRF1Q16656 AP002530.1-201ENST00000405705 684 ntBASIC4.42□□□□□ -1.7
NRF1Q16656 RN7SKP167-201ENST00000411047 285 ntBASIC4.42□□□□□ -1.7
NRF1Q16656 Y_RNA.625-201ENST00000411256 107 ntBASIC4.42□□□□□ -1.7
NRF1Q16656 RAB9AP4-201ENST00000415230 609 ntBASIC4.42□□□□□ -1.7
NRF1Q16656 LINC00993-201ENST00000420453 540 ntBASIC4.42□□□□□ -1.7
NRF1Q16656 AL645608.4-201ENST00000423619 154 ntBASIC4.42□□□□□ -1.7
NRF1Q16656 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.42□□□□□ -1.7
NRF1Q16656 FCF1P7-201ENST00000451185 558 ntBASIC4.42□□□□□ -1.7
NRF1Q16656 RPL5P30-201ENST00000465511 891 ntBASIC4.42□□□□□ -1.7
NRF1Q16656 AC092324.1-201ENST00000468671 324 ntBASIC4.42□□□□□ -1.7
NRF1Q16656 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.42□□□□□ -1.7
NRF1Q16656 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.42□□□□□ -1.7
NRF1Q16656 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.42□□□□□ -1.7
NRF1Q16656 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NRF1Q16656 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.42□□□□□ -1.7
NRF1Q16656 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.42□□□□□ -1.7
NRF1Q16656 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.42□□□□□ -1.7
NRF1Q16656 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.42□□□□□ -1.7
NRF1Q16656 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.42□□□□□ -1.7
NRF1Q16656 AC011453.2-201ENST00000603737 729 ntBASIC4.42□□□□□ -1.7
NRF1Q16656 FAM25E-202ENST00000608562 189 ntBASIC4.42□□□□□ -1.7
NRF1Q16656 AL353726.1-201ENST00000614041 1000 ntBASIC4.42□□□□□ -1.7
NRF1Q16656 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.42□□□□□ -1.7
NRF1Q16656 AC010435.1-201ENST00000623353 1177 ntBASIC4.42□□□□□ -1.7
NRF1Q16656 AC112694.2-201ENST00000623697 768 ntBASIC4.42□□□□□ -1.7
NRF1Q16656 AL355852.1-201ENST00000454081 1771 ntBASIC4.42□□□□□ -1.7
NRF1Q16656 KPNA2P2-201ENST00000419546 1489 ntBASIC4.42□□□□□ -1.7
NRF1Q16656 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
NRF1Q16656 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NRF1Q16656 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NRF1Q16656 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NRF1Q16656 AL136164.3-201ENST00000624429 3978 ntBASIC4.41□□□□□ -1.7
NRF1Q16656 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NRF1Q16656 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NRF1Q16656 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
NRF1Q16656 TLK1P1-201ENST00000456760 2440 ntBASIC4.41□□□□□ -1.7
NRF1Q16656 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NRF1Q16656 MAPK10-304ENST00000641341 3984 ntBASIC4.41□□□□□ -1.7
NRF1Q16656 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NRF1Q16656 MIR448-201ENST00000362131 111 ntBASIC4.41□□□□□ -1.7
NRF1Q16656 RNA5SP123-201ENST00000363244 119 ntBASIC4.41□□□□□ -1.7
NRF1Q16656 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NRF1Q16656 SNORA51.8-201ENST00000384234 132 ntBASIC4.41□□□□□ -1.7
NRF1Q16656 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NRF1Q16656 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NRF1Q16656 COX6B1P1-201ENST00000415962 213 ntBASIC4.41□□□□□ -1.7
NRF1Q16656 RPA2P2-201ENST00000419698 796 ntBASIC4.41□□□□□ -1.7
NRF1Q16656 PTP4A1P1-201ENST00000420539 515 ntBASIC4.41□□□□□ -1.7
NRF1Q16656 AC104837.2-201ENST00000427236 424 ntBASIC4.41□□□□□ -1.7
NRF1Q16656 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.41□□□□□ -1.7
NRF1Q16656 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NRF1Q16656 MAPRE1P3-201ENST00000435438 796 ntBASIC4.41□□□□□ -1.7
NRF1Q16656 AC069285.2-201ENST00000440210 275 ntBASIC4.41□□□□□ -1.7
NRF1Q16656 RPL31P44-201ENST00000447680 377 ntBASIC4.41□□□□□ -1.7
NRF1Q16656 THAP12P8-201ENST00000447914 2115 ntBASIC4.41□□□□□ -1.7
NRF1Q16656 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.41□□□□□ -1.7
NRF1Q16656 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.41□□□□□ -1.7
NRF1Q16656 TRY2P-201ENST00000448860 689 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms