Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MTND5P5-201ENST00000503764 376 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 KCTD9P5-201ENST00000504141 1170 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDH1Q08174 SCARNA5-201ENST00000516201 276 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 Y_RNA.701-201ENST00000516812 110 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 SNORA48.10-201ENST00000516965 160 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 AC027309.2-201ENST00000520566 192 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 IGLV3-6-201ENST00000523937 250 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 OR5D2P-201ENST00000524390 911 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDH1Q08174 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDH1Q08174 PHBP2-201ENST00000532859 806 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 AC068587.4-201ENST00000533893 186 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 AL162632.2-201ENST00000553933 399 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDH1Q08174 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDH1Q08174 BNIP3P23-201ENST00000599655 511 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 MIR3662-201ENST00000637030 95 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 AC112487.2-201ENST00000637950 304 ntBASIC6.4□□□□□ -1.38
PCDH1Q08174 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
PCDH1Q08174 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
PCDH1Q08174 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDH1Q08174 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC6.4□□□□□ -1.39
PCDH1Q08174 AL591848.4-201ENST00000567832 3472 ntBASIC6.4□□□□□ -1.39
PCDH1Q08174 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDH1Q08174 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.4□□□□□ -1.39
PCDH1Q08174 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.4□□□□□ -1.39
PCDH1Q08174 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.4□□□□□ -1.39
PCDH1Q08174 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.4□□□□□ -1.39
PCDH1Q08174 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.39
PCDH1Q08174 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDH1Q08174 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.4□□□□□ -1.39
PCDH1Q08174 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PCDH1Q08174 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDH1Q08174 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
PCDH1Q08174 LINC00561-201ENST00000565815 2738 ntBASIC6.4□□□□□ -1.39
PCDH1Q08174 TTC41P-205ENST00000551270 3963 ntBASIC6.4□□□□□ -1.39
PCDH1Q08174 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDH1Q08174 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDH1Q08174 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PCDH1Q08174 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
PCDH1Q08174 MAPK10-287ENST00000641217 3037 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDH1Q08174 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDH1Q08174 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDH1Q08174 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDH1Q08174 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDH1Q08174 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDH1Q08174 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDH1Q08174 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDH1Q08174 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDH1Q08174 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDH1Q08174 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 AL023284.3-201ENST00000407767 334 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 AC092634.6-201ENST00000418558 192 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 AC000089.1-201ENST00000424559 801 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDH1Q08174 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDH1Q08174 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDH1Q08174 MTND6P13-201ENST00000443510 523 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 UBBP5-201ENST00000446970 266 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 MTCO3P20-201ENST00000454926 688 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDH1Q08174 RNU7-27P-201ENST00000459281 62 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 RPL38P1-201ENST00000460914 211 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 AC087312.1-201ENST00000471411 480 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 AC023598.1-201ENST00000472521 361 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 AC099340.1-201ENST00000475247 599 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDH1Q08174 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDH1Q08174 IMPA1P1-201ENST00000510718 842 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 AC010493.1-201ENST00000513479 292 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 ARL2BPP5-201ENST00000523141 481 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 AC013828.2-201ENST00000532487 235 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDH1Q08174 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PCDH1Q08174 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDH1Q08174 CBX3P5-201ENST00000552017 521 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDH1Q08174 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDH1Q08174 AL442663.2-201ENST00000554385 511 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 AL512360.1-201ENST00000555346 234 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 AL390334.1-201ENST00000556395 450 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDH1Q08174 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDH1Q08174 AC093519.1-201ENST00000566109 298 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 AC002519.2-203ENST00000567043 837 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 AC025678.1-201ENST00000567861 338 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 ZNF322P1-201ENST00000568013 1209 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDH1Q08174 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDH1Q08174 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.39□□□□□ -1.39
PCDH1Q08174 RPS4XP21-201ENST00000603814 750 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 BNIP3P11-201ENST00000603878 563 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PCDH1Q08174 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDH1Q08174 AC145207.9-201ENST00000623802 325 ntBASIC6.39□□□□□ -1.39
PCDH1Q08174 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDH1Q08174 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms