Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.5□□□□□ -1.85
CCL20P78556 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.5□□□□□ -1.85
CCL20P78556 VPS35P1-201ENST00000563400 1518 ntBASIC3.49□□□□□ -1.85
CCL20P78556 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.49□□□□□ -1.85
CCL20P78556 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.49□□□□□ -1.85
CCL20P78556 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCL20P78556 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCL20P78556 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCL20P78556 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.49□□□□□ -1.85
CCL20P78556 SNURFL-201ENST00000309296 343 ntBASIC3.49□□□□□ -1.85
CCL20P78556 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCL20P78556 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.49□□□□□ -1.85
CCL20P78556 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CCL20P78556 RNU6-178P-201ENST00000384631 104 ntBASIC3.49□□□□□ -1.85
CCL20P78556 MIR1911-201ENST00000410783 80 ntBASIC3.49□□□□□ -1.85
CCL20P78556 AL591848.1-201ENST00000413092 322 ntBASIC3.49□□□□□ -1.85
CCL20P78556 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CCL20P78556 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.49□□□□□ -1.85
CCL20P78556 AC073136.2-201ENST00000417282 849 ntBASIC3.49□□□□□ -1.85
CCL20P78556 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC3.49□□□□□ -1.85
CCL20P78556 AC234779.1-201ENST00000425910 285 ntBASIC3.49□□□□□ -1.85
CCL20P78556 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCL20P78556 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC3.49□□□□□ -1.85
CCL20P78556 AC243772.1-201ENST00000451620 410 ntBASIC3.49□□□□□ -1.85
CCL20P78556 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC3.49□□□□□ -1.85
CCL20P78556 AC146944.2-203ENST00000502493 354 ntBASIC3.49□□□□□ -1.85
CCL20P78556 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC3.49□□□□□ -1.85
CCL20P78556 AC139495.1-202ENST00000513164 354 ntBASIC3.49□□□□□ -1.85
CCL20P78556 SNORD46.2-201ENST00000516021 102 ntBASIC3.49□□□□□ -1.85
CCL20P78556 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.49□□□□□ -1.85
CCL20P78556 MORF4L1P3-201ENST00000525966 950 ntBASIC3.49□□□□□ -1.85
CCL20P78556 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.49□□□□□ -1.85
CCL20P78556 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC3.49□□□□□ -1.85
CCL20P78556 MIR4691-201ENST00000583764 85 ntBASIC3.49□□□□□ -1.85
CCL20P78556 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC3.49□□□□□ -1.85
CCL20P78556 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC3.49□□□□□ -1.85
CCL20P78556 AC005034.4-201ENST00000603612 899 ntBASIC3.49□□□□□ -1.85
CCL20P78556 AC100767.2-201ENST00000604840 693 ntBASIC3.49□□□□□ -1.85
CCL20P78556 AC104695.2-201ENST00000605056 775 ntBASIC3.49□□□□□ -1.85
CCL20P78556 FAM27B-201ENST00000610601 213 ntBASIC3.49□□□□□ -1.85
CCL20P78556 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.49□□□□□ -1.85
CCL20P78556 AC138907.10-201ENST00000623708 983 ntBASIC3.49□□□□□ -1.85
CCL20P78556 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CCL20P78556 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCL20P78556 RNF19BPY-201ENST00000458209 1550 ntBASIC3.49□□□□□ -1.85
CCL20P78556 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CCL20P78556 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.49□□□□□ -1.85
CCL20P78556 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCL20P78556 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.49□□□□□ -1.85
CCL20P78556 AC083899.2-201ENST00000423285 1376 ntBASIC3.49□□□□□ -1.85
CCL20P78556 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCL20P78556 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCL20P78556 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CCL20P78556 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCL20P78556 AL627171.1-201ENST00000618845 1308 ntBASIC3.48□□□□□ -1.85
CCL20P78556 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
CCL20P78556 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCL20P78556 RNA5SP183-201ENST00000362452 119 ntBASIC3.48□□□□□ -1.85
CCL20P78556 RNU6-1331P-201ENST00000363658 106 ntBASIC3.48□□□□□ -1.85
CCL20P78556 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCL20P78556 RNA5SP284-201ENST00000384547 118 ntBASIC3.48□□□□□ -1.85
CCL20P78556 NCSTNP1-201ENST00000406229 144 ntBASIC3.48□□□□□ -1.85
CCL20P78556 RNU6-233P-201ENST00000410845 141 ntBASIC3.48□□□□□ -1.85
CCL20P78556 SNORA74C-2-201ENST00000411179 201 ntBASIC3.48□□□□□ -1.85
CCL20P78556 RPL35AP24-201ENST00000413846 330 ntBASIC3.48□□□□□ -1.85
CCL20P78556 AC009302.1-201ENST00000417147 390 ntBASIC3.48□□□□□ -1.85
CCL20P78556 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.48□□□□□ -1.85
CCL20P78556 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.48□□□□□ -1.85
CCL20P78556 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCL20P78556 RPL7P11-201ENST00000437586 658 ntBASIC3.48□□□□□ -1.85
CCL20P78556 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC3.48□□□□□ -1.85
CCL20P78556 H2AFZP5-201ENST00000446960 382 ntBASIC3.48□□□□□ -1.85
CCL20P78556 SLC25A18P1-201ENST00000449385 454 ntBASIC3.48□□□□□ -1.85
CCL20P78556 VN1R32P-201ENST00000452234 905 ntBASIC3.48□□□□□ -1.85
CCL20P78556 YWHAEP1-201ENST00000453697 763 ntBASIC3.48□□□□□ -1.85
CCL20P78556 RPS26P39-201ENST00000469206 341 ntBASIC3.48□□□□□ -1.85
CCL20P78556 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC3.48□□□□□ -1.85
CCL20P78556 RN7SL184P-201ENST00000488308 297 ntBASIC3.48□□□□□ -1.85
CCL20P78556 RN7SL612P-201ENST00000497704 295 ntBASIC3.48□□□□□ -1.85
CCL20P78556 MIR2114-201ENST00000516645 80 ntBASIC3.48□□□□□ -1.85
CCL20P78556 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC3.48□□□□□ -1.85
CCL20P78556 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCL20P78556 AP006289.1-201ENST00000538089 277 ntBASIC3.48□□□□□ -1.85
CCL20P78556 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.48□□□□□ -1.85
CCL20P78556 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CCL20P78556 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.48□□□□□ -1.85
CCL20P78556 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.48□□□□□ -1.85
CCL20P78556 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC3.48□□□□□ -1.85
CCL20P78556 BPIFA4P-203ENST00000603168 689 ntBASIC3.48□□□□□ -1.85
CCL20P78556 AC020910.3-201ENST00000603701 874 ntBASIC3.48□□□□□ -1.85
CCL20P78556 AL713998.2-201ENST00000604538 1198 ntBASIC3.48□□□□□ -1.85
CCL20P78556 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.48□□□□□ -1.85
CCL20P78556 AC131238.1-201ENST00000617135 328 ntBASIC3.48□□□□□ -1.85
CCL20P78556 AL357153.4-201ENST00000620487 1016 ntBASIC3.48□□□□□ -1.85
CCL20P78556 MIR6813-201ENST00000621638 56 ntBASIC3.48□□□□□ -1.85
CCL20P78556 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.48□□□□□ -1.85
CCL20P78556 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.48□□□□□ -1.85
CCL20P78556 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCL20P78556 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CCL20P78556 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms