Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 COPS8P2-201ENST00000473228 627 ntBASIC5.05□□□□□ -1.6
TPM4P67936 IGLV2-34-201ENST00000490007 283 ntBASIC5.05□□□□□ -1.6
TPM4P67936 RPL7P51-201ENST00000490532 749 ntBASIC5.05□□□□□ -1.6
TPM4P67936 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.05□□□□□ -1.6
TPM4P67936 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.05□□□□□ -1.6
TPM4P67936 SCARNA21.2-201ENST00000516600 166 ntBASIC5.05□□□□□ -1.6
TPM4P67936 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.05□□□□□ -1.6
TPM4P67936 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.05□□□□□ -1.6
TPM4P67936 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.05□□□□□ -1.6
TPM4P67936 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.05□□□□□ -1.6
TPM4P67936 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.05□□□□□ -1.6
TPM4P67936 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.05□□□□□ -1.6
TPM4P67936 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.05□□□□□ -1.6
TPM4P67936 CYP4A43P-201ENST00000568156 121 ntBASIC5.05□□□□□ -1.6
TPM4P67936 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.05□□□□□ -1.6
TPM4P67936 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.05□□□□□ -1.6
TPM4P67936 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.05□□□□□ -1.6
TPM4P67936 AC018529.3-201ENST00000624212 2254 ntBASIC5.05□□□□□ -1.6
TPM4P67936 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TPM4P67936 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TPM4P67936 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TPM4P67936 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TPM4P67936 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TPM4P67936 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.05□□□□□ -1.6
TPM4P67936 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TPM4P67936 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
TPM4P67936 AC011266.1-201ENST00000624119 3569 ntBASIC5.04□□□□□ -1.6
TPM4P67936 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TPM4P67936 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.04□□□□□ -1.6
TPM4P67936 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TPM4P67936 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.04□□□□□ -1.6
TPM4P67936 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
TPM4P67936 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TPM4P67936 RN7SKP95-201ENST00000362860 303 ntBASIC5.04□□□□□ -1.6
TPM4P67936 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.04□□□□□ -1.6
TPM4P67936 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.04□□□□□ -1.6
TPM4P67936 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.04□□□□□ -1.6
TPM4P67936 RPS23P10-201ENST00000416185 486 ntBASIC5.04□□□□□ -1.6
TPM4P67936 AC140479.3-201ENST00000418944 1126 ntBASIC5.04□□□□□ -1.6
TPM4P67936 NANOGP6-201ENST00000429190 847 ntBASIC5.04□□□□□ -1.6
TPM4P67936 CDY14P-201ENST00000431260 1014 ntBASIC5.04□□□□□ -1.6
TPM4P67936 BX119904.1-201ENST00000432026 348 ntBASIC5.04□□□□□ -1.6
TPM4P67936 AC097523.2-201ENST00000435551 652 ntBASIC5.04□□□□□ -1.6
TPM4P67936 CDY12P-201ENST00000440679 1015 ntBASIC5.04□□□□□ -1.6
TPM4P67936 CNOT7P2-201ENST00000441051 832 ntBASIC5.04□□□□□ -1.6
TPM4P67936 CDY13P-201ENST00000445813 1015 ntBASIC5.04□□□□□ -1.6
TPM4P67936 AL451050.1-201ENST00000450126 415 ntBASIC5.04□□□□□ -1.6
TPM4P67936 CDY23P-201ENST00000451661 1014 ntBASIC5.04□□□□□ -1.6
TPM4P67936 SEPT14P1-201ENST00000458703 648 ntBASIC5.04□□□□□ -1.6
TPM4P67936 RPL23AP2-201ENST00000471227 466 ntBASIC5.04□□□□□ -1.6
TPM4P67936 AC008410.1-201ENST00000483777 339 ntBASIC5.04□□□□□ -1.6
TPM4P67936 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.04□□□□□ -1.6
TPM4P67936 RNU6-943P-201ENST00000516960 98 ntBASIC5.04□□□□□ -1.6
TPM4P67936 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.04□□□□□ -1.6
TPM4P67936 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.04□□□□□ -1.6
TPM4P67936 AC010201.1-201ENST00000605051 540 ntBASIC5.04□□□□□ -1.6
TPM4P67936 AL121873.1-201ENST00000616013 524 ntBASIC5.04□□□□□ -1.6
TPM4P67936 AC007546.2-201ENST00000623996 360 ntBASIC5.04□□□□□ -1.6
TPM4P67936 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.04□□□□□ -1.6
TPM4P67936 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.04□□□□□ -1.6
TPM4P67936 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
TPM4P67936 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TPM4P67936 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
TPM4P67936 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC5.04□□□□□ -1.6
TPM4P67936 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TPM4P67936 THAP12P8-201ENST00000447914 2115 ntBASIC5.03□□□□□ -1.6
TPM4P67936 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
TPM4P67936 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.03□□□□□ -1.6
TPM4P67936 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TPM4P67936 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TPM4P67936 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.03□□□□□ -1.6
TPM4P67936 RNA5SP307-201ENST00000362863 116 ntBASIC5.03□□□□□ -1.6
TPM4P67936 CHMP1B2P-201ENST00000399581 597 ntBASIC5.03□□□□□ -1.6
TPM4P67936 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
TPM4P67936 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TPM4P67936 RN7SKP167-201ENST00000411047 285 ntBASIC5.03□□□□□ -1.6
TPM4P67936 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.03□□□□□ -1.6
TPM4P67936 OR2B7P-201ENST00000429302 934 ntBASIC5.03□□□□□ -1.6
TPM4P67936 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.03□□□□□ -1.6
TPM4P67936 MTND6P18-201ENST00000439477 513 ntBASIC5.03□□□□□ -1.6
TPM4P67936 RPL7L1P1-201ENST00000448259 785 ntBASIC5.03□□□□□ -1.6
TPM4P67936 OR1H1P-201ENST00000448731 937 ntBASIC5.03□□□□□ -1.6
TPM4P67936 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.03□□□□□ -1.6
TPM4P67936 RPL36AP41-201ENST00000493820 306 ntBASIC5.03□□□□□ -1.6
TPM4P67936 RPL37AP8-201ENST00000494116 276 ntBASIC5.03□□□□□ -1.6
TPM4P67936 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TPM4P67936 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
TPM4P67936 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.03□□□□□ -1.6
TPM4P67936 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.03□□□□□ -1.6
TPM4P67936 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.03□□□□□ -1.6
TPM4P67936 IFITM8P-201ENST00000522529 394 ntBASIC5.03□□□□□ -1.6
TPM4P67936 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.03□□□□□ -1.6
TPM4P67936 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.03□□□□□ -1.6
TPM4P67936 BPIFA4P-203ENST00000603168 689 ntBASIC5.03□□□□□ -1.6
TPM4P67936 AP000864.1-201ENST00000609424 650 ntBASIC5.03□□□□□ -1.6
TPM4P67936 AL121612.2-201ENST00000612261 482 ntBASIC5.03□□□□□ -1.6
TPM4P67936 AL512356.3-201ENST00000623005 461 ntBASIC5.03□□□□□ -1.6
TPM4P67936 AC091905.4-201ENST00000623432 202 ntBASIC5.03□□□□□ -1.6
TPM4P67936 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
TPM4P67936 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms