Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC004022.1-201ENST00000447766 1066 ntBASIC4.68□□□□□ -1.66
SEC61A1P61619 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.68□□□□□ -1.66
SEC61A1P61619 AC090804.1-201ENST00000448870 490 ntBASIC4.68□□□□□ -1.66
SEC61A1P61619 CYCSP42-201ENST00000450823 238 ntBASIC4.68□□□□□ -1.66
SEC61A1P61619 AL450023.1-201ENST00000450868 751 ntBASIC4.68□□□□□ -1.66
SEC61A1P61619 VDAC2P4-201ENST00000452925 711 ntBASIC4.68□□□□□ -1.66
SEC61A1P61619 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.68□□□□□ -1.66
SEC61A1P61619 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.68□□□□□ -1.66
SEC61A1P61619 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SEC61A1P61619 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SEC61A1P61619 RN7SL346P-201ENST00000491561 294 ntBASIC4.68□□□□□ -1.66
SEC61A1P61619 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.68□□□□□ -1.66
SEC61A1P61619 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.68□□□□□ -1.66
SEC61A1P61619 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SEC61A1P61619 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.68□□□□□ -1.66
SEC61A1P61619 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.68□□□□□ -1.66
SEC61A1P61619 OR5AM1P-201ENST00000532136 1032 ntBASIC4.68□□□□□ -1.66
SEC61A1P61619 AC027369.5-201ENST00000533838 755 ntBASIC4.68□□□□□ -1.66
SEC61A1P61619 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.68□□□□□ -1.66
SEC61A1P61619 ZNF321P-202ENST00000550843 495 ntBASIC4.68□□□□□ -1.66
SEC61A1P61619 AC006349.1-201ENST00000555526 235 ntBASIC4.68□□□□□ -1.66
SEC61A1P61619 MIR4311-201ENST00000580794 100 ntBASIC4.68□□□□□ -1.66
SEC61A1P61619 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.68□□□□□ -1.66
SEC61A1P61619 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.68□□□□□ -1.66
SEC61A1P61619 AL022161.1-201ENST00000604390 213 ntBASIC4.68□□□□□ -1.66
SEC61A1P61619 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.68□□□□□ -1.66
SEC61A1P61619 AC064807.4-201ENST00000607201 407 ntBASIC4.68□□□□□ -1.66
SEC61A1P61619 AL135786.2-201ENST00000608422 615 ntBASIC4.68□□□□□ -1.66
SEC61A1P61619 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.68□□□□□ -1.66
SEC61A1P61619 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.68□□□□□ -1.66
SEC61A1P61619 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SEC61A1P61619 AC013470.4-201ENST00000619978 986 ntBASIC4.68□□□□□ -1.66
SEC61A1P61619 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SEC61A1P61619 RARSP1-201ENST00000542842 1418 ntBASIC4.68□□□□□ -1.66
SEC61A1P61619 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SEC61A1P61619 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.68□□□□□ -1.66
SEC61A1P61619 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SEC61A1P61619 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.68□□□□□ -1.66
SEC61A1P61619 AC007342.7-201ENST00000624610 2337 ntBASIC4.68□□□□□ -1.66
SEC61A1P61619 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SEC61A1P61619 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.68□□□□□ -1.66
SEC61A1P61619 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.68□□□□□ -1.66
SEC61A1P61619 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.68□□□□□ -1.66
SEC61A1P61619 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SEC61A1P61619 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.68□□□□□ -1.66
SEC61A1P61619 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SEC61A1P61619 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SEC61A1P61619 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
SEC61A1P61619 AL022393.1-201ENST00000625142 1677 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SEC61A1P61619 OR55B1P-203ENST00000641518 2602 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
SEC61A1P61619 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SEC61A1P61619 HSPD1P11-201ENST00000508643 1702 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SEC61A1P61619 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SEC61A1P61619 AL672167.1-204ENST00000641875 3017 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SEC61A1P61619 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SEC61A1P61619 RNA5SP234-201ENST00000363916 119 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 RNU4-7P-201ENST00000364758 141 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SEC61A1P61619 UBBP2-201ENST00000376781 231 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 U6.112-201ENST00000384129 70 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 MIR143-201ENST00000385300 106 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 MCTS2P-201ENST00000394552 546 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 HMGB1P10-201ENST00000395823 563 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.67□□□□□ -1.66
SEC61A1P61619 AL359643.1-201ENST00000404109 423 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 RN7SKP59-201ENST00000410520 314 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 RPL12P9-201ENST00000412942 488 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.67□□□□□ -1.66
SEC61A1P61619 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.67□□□□□ -1.66
SEC61A1P61619 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SEC61A1P61619 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.67□□□□□ -1.66
SEC61A1P61619 USP9YP21-201ENST00000420603 432 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SEC61A1P61619 RPL23AP4-201ENST00000427757 463 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.67□□□□□ -1.66
SEC61A1P61619 RPL19P16-201ENST00000433839 588 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.67□□□□□ -1.66
SEC61A1P61619 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.67□□□□□ -1.66
SEC61A1P61619 AC023512.1-201ENST00000444513 499 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 AL596266.1-201ENST00000448132 400 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 ZNF886P-201ENST00000450781 723 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 Z95152.1-201ENST00000453556 656 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 RN7SL177P-201ENST00000476596 299 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 AC004263.1-201ENST00000479327 332 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 SIAH1P1-201ENST00000479411 923 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.67□□□□□ -1.66
SEC61A1P61619 UBA52P7-201ENST00000486088 380 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 RN7SL547P-201ENST00000490793 290 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SEC61A1P61619 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.67□□□□□ -1.66
SEC61A1P61619 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.67□□□□□ -1.66
SEC61A1P61619 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SEC61A1P61619 AC091912.1-201ENST00000511351 248 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 SNORA31.13-201ENST00000516624 135 ntBASIC4.67□□□□□ -1.66
SEC61A1P61619 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.67□□□□□ -1.66
SEC61A1P61619 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms