Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH11P55287 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH11P55287 RNU5A-7P-201ENST00000515979 116 ntBASIC4.64□□□□□ -1.67
CDH11P55287 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH11P55287 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH11P55287 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDH11P55287 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.64□□□□□ -1.67
CDH11P55287 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH11P55287 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CDH11P55287 MIR3691-201ENST00000578066 90 ntBASIC4.64□□□□□ -1.67
CDH11P55287 AP002884.5-201ENST00000595053 1132 ntBASIC4.64□□□□□ -1.67
CDH11P55287 AC008536.1-201ENST00000602872 669 ntBASIC4.64□□□□□ -1.67
CDH11P55287 AC026741.1-201ENST00000605892 482 ntBASIC4.64□□□□□ -1.67
CDH11P55287 AC009163.6-201ENST00000612367 342 ntBASIC4.64□□□□□ -1.67
CDH11P55287 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH11P55287 AC007275.1-201ENST00000621243 671 ntBASIC4.64□□□□□ -1.67
CDH11P55287 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.64□□□□□ -1.67
CDH11P55287 AL356118.1-201ENST00000635272 1078 ntBASIC4.64□□□□□ -1.67
CDH11P55287 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CDH11P55287 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH11P55287 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH11P55287 AC011447.7-201ENST00000624228 1590 ntBASIC4.64□□□□□ -1.67
CDH11P55287 AL645568.2-201ENST00000432815 1337 ntBASIC4.64□□□□□ -1.67
CDH11P55287 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CDH11P55287 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDH11P55287 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH11P55287 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH11P55287 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH11P55287 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH11P55287 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH11P55287 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.63□□□□□ -1.67
CDH11P55287 OR55B1P-203ENST00000641518 2602 ntBASIC4.63□□□□□ -1.67
CDH11P55287 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CDH11P55287 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.63□□□□□ -1.67
CDH11P55287 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
CDH11P55287 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH11P55287 AP001642.1-201ENST00000624727 2117 ntBASIC4.63□□□□□ -1.67
CDH11P55287 MTND5P11-201ENST00000511037 1812 ntBASIC4.63□□□□□ -1.67
CDH11P55287 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH11P55287 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CDH11P55287 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH11P55287 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH11P55287 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH11P55287 U8.4-201ENST00000363626 134 ntBASIC4.63□□□□□ -1.67
CDH11P55287 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH11P55287 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH11P55287 MIR765-201ENST00000390226 114 ntBASIC4.63□□□□□ -1.67
CDH11P55287 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CDH11P55287 AL645927.1-201ENST00000396783 406 ntBASIC4.63□□□□□ -1.67
CDH11P55287 ATP5HP3-201ENST00000396994 486 ntBASIC4.63□□□□□ -1.67
CDH11P55287 AC013442.1-201ENST00000397347 228 ntBASIC4.63□□□□□ -1.67
CDH11P55287 VDAC2P1-201ENST00000399358 958 ntBASIC4.63□□□□□ -1.67
CDH11P55287 DUTP5-201ENST00000406790 469 ntBASIC4.63□□□□□ -1.67
CDH11P55287 RN7SKP247-201ENST00000411094 308 ntBASIC4.63□□□□□ -1.67
CDH11P55287 TATDN1P1-201ENST00000414123 891 ntBASIC4.63□□□□□ -1.67
CDH11P55287 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH11P55287 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.63□□□□□ -1.67
CDH11P55287 COX6CP13-201ENST00000428703 226 ntBASIC4.63□□□□□ -1.67
CDH11P55287 RPL34P6-201ENST00000432390 345 ntBASIC4.63□□□□□ -1.67
CDH11P55287 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CDH11P55287 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.63□□□□□ -1.67
CDH11P55287 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.63□□□□□ -1.67
CDH11P55287 RPL7AP61-201ENST00000443410 636 ntBASIC4.63□□□□□ -1.67
CDH11P55287 RPL7P33-201ENST00000444159 742 ntBASIC4.63□□□□□ -1.67
CDH11P55287 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH11P55287 RBMY2TP-201ENST00000451162 947 ntBASIC4.63□□□□□ -1.67
CDH11P55287 RN7SL329P-201ENST00000467740 299 ntBASIC4.63□□□□□ -1.67
CDH11P55287 RPL7AP6-201ENST00000477943 801 ntBASIC4.63□□□□□ -1.67
CDH11P55287 AC093270.2-201ENST00000486157 792 ntBASIC4.63□□□□□ -1.67
CDH11P55287 RN7SL346P-201ENST00000491561 294 ntBASIC4.63□□□□□ -1.67
CDH11P55287 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH11P55287 AC108120.2-201ENST00000512973 294 ntBASIC4.63□□□□□ -1.67
CDH11P55287 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH11P55287 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH11P55287 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH11P55287 AC104115.2-201ENST00000523026 687 ntBASIC4.63□□□□□ -1.67
CDH11P55287 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH11P55287 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.63□□□□□ -1.67
CDH11P55287 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH11P55287 AP003066.2-201ENST00000529375 555 ntBASIC4.63□□□□□ -1.67
CDH11P55287 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CDH11P55287 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH11P55287 GLRXP2-201ENST00000555594 321 ntBASIC4.63□□□□□ -1.67
CDH11P55287 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH11P55287 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.63□□□□□ -1.67
CDH11P55287 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.63□□□□□ -1.67
CDH11P55287 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.63□□□□□ -1.67
CDH11P55287 AC106734.1-201ENST00000568646 663 ntBASIC4.63□□□□□ -1.67
CDH11P55287 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.63□□□□□ -1.67
CDH11P55287 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.63□□□□□ -1.67
CDH11P55287 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.63□□□□□ -1.67
CDH11P55287 TAS2R6P-201ENST00000605022 826 ntBASIC4.63□□□□□ -1.67
CDH11P55287 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.63□□□□□ -1.67
CDH11P55287 AP005229.2-201ENST00000609980 697 ntBASIC4.63□□□□□ -1.67
CDH11P55287 AC016597.2-201ENST00000613256 341 ntBASIC4.63□□□□□ -1.67
CDH11P55287 AC008759.3-201ENST00000613300 508 ntBASIC4.63□□□□□ -1.67
CDH11P55287 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.63□□□□□ -1.67
CDH11P55287 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.63□□□□□ -1.67
CDH11P55287 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH11P55287 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms