Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.17□□□□□ -1.74
CX3CR1P49238 MIR6886-201ENST00000619864 61 ntBASIC4.17□□□□□ -1.74
CX3CR1P49238 AP002799.1-201ENST00000623552 423 ntBASIC4.17□□□□□ -1.74
CX3CR1P49238 AC011815.3-201ENST00000624194 473 ntBASIC4.17□□□□□ -1.74
CX3CR1P49238 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.17□□□□□ -1.74
CX3CR1P49238 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.17□□□□□ -1.74
CX3CR1P49238 AC104118.1-201ENST00000607625 1589 ntBASIC4.17□□□□□ -1.74
CX3CR1P49238 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CX3CR1P49238 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.17□□□□□ -1.74
CX3CR1P49238 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CX3CR1P49238 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CX3CR1P49238 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CX3CR1P49238 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.16□□□□□ -1.74
CX3CR1P49238 AC120338.1-201ENST00000625074 1541 ntBASIC4.16□□□□□ -1.74
CX3CR1P49238 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CX3CR1P49238 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.16□□□□□ -1.74
CX3CR1P49238 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CX3CR1P49238 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.16□□□□□ -1.74
CX3CR1P49238 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CX3CR1P49238 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CX3CR1P49238 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CX3CR1P49238 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CX3CR1P49238 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.16□□□□□ -1.74
CX3CR1P49238 RNU1-94P-201ENST00000362627 173 ntBASIC4.16□□□□□ -1.74
CX3CR1P49238 RNU6-618P-201ENST00000363518 112 ntBASIC4.16□□□□□ -1.74
CX3CR1P49238 RNU6-670P-201ENST00000364312 104 ntBASIC4.16□□□□□ -1.74
CX3CR1P49238 U3.30-201ENST00000391308 210 ntBASIC4.16□□□□□ -1.74
CX3CR1P49238 ARL4AP5-201ENST00000404372 599 ntBASIC4.16□□□□□ -1.74
CX3CR1P49238 RN7SKP229-201ENST00000410465 302 ntBASIC4.16□□□□□ -1.74
CX3CR1P49238 RN7SKP222-201ENST00000410651 315 ntBASIC4.16□□□□□ -1.74
CX3CR1P49238 VDAC1P9-201ENST00000412766 841 ntBASIC4.16□□□□□ -1.74
CX3CR1P49238 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.16□□□□□ -1.74
CX3CR1P49238 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.16□□□□□ -1.74
CX3CR1P49238 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.16□□□□□ -1.74
CX3CR1P49238 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.16□□□□□ -1.74
CX3CR1P49238 APOOP2-201ENST00000461561 539 ntBASIC4.16□□□□□ -1.74
CX3CR1P49238 RN7SL817P-201ENST00000480777 288 ntBASIC4.16□□□□□ -1.74
CX3CR1P49238 RN7SL727P-201ENST00000482164 296 ntBASIC4.16□□□□□ -1.74
CX3CR1P49238 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.16□□□□□ -1.74
CX3CR1P49238 MTCYBP19-201ENST00000517463 1124 ntBASIC4.16□□□□□ -1.74
CX3CR1P49238 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.16□□□□□ -1.74
CX3CR1P49238 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.16□□□□□ -1.74
CX3CR1P49238 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CX3CR1P49238 AC125612.1-201ENST00000547580 377 ntBASIC4.16□□□□□ -1.74
CX3CR1P49238 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.16□□□□□ -1.74
CX3CR1P49238 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.16□□□□□ -1.74
CX3CR1P49238 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.16□□□□□ -1.74
CX3CR1P49238 AC079075.1-201ENST00000559543 878 ntBASIC4.16□□□□□ -1.74
CX3CR1P49238 AC068714.1-201ENST00000559623 800 ntBASIC4.16□□□□□ -1.74
CX3CR1P49238 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.16□□□□□ -1.74
CX3CR1P49238 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.16□□□□□ -1.74
CX3CR1P49238 ATP5J2P6-201ENST00000565203 266 ntBASIC4.16□□□□□ -1.74
CX3CR1P49238 AC018552.3-201ENST00000567416 561 ntBASIC4.16□□□□□ -1.74
CX3CR1P49238 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.16□□□□□ -1.74
CX3CR1P49238 AC010200.2-201ENST00000605098 235 ntBASIC4.16□□□□□ -1.74
CX3CR1P49238 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.16□□□□□ -1.74
CX3CR1P49238 AC007497.1-201ENST00000610421 561 ntBASIC4.16□□□□□ -1.74
CX3CR1P49238 MIR6862-1-201ENST00000613016 70 ntBASIC4.16□□□□□ -1.74
CX3CR1P49238 MIR6862-2-201ENST00000614755 70 ntBASIC4.16□□□□□ -1.74
CX3CR1P49238 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.16□□□□□ -1.74
CX3CR1P49238 AC091905.4-201ENST00000623432 202 ntBASIC4.16□□□□□ -1.74
CX3CR1P49238 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CX3CR1P49238 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CX3CR1P49238 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.16□□□□□ -1.74
CX3CR1P49238 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CX3CR1P49238 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CX3CR1P49238 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CX3CR1P49238 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
CX3CR1P49238 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CX3CR1P49238 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
CX3CR1P49238 AC090017.1-201ENST00000548612 1779 ntBASIC4.15□□□□□ -1.74
CX3CR1P49238 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CX3CR1P49238 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CX3CR1P49238 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.15□□□□□ -1.74
CX3CR1P49238 RNA5SP305-201ENST00000362665 119 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 RNA5SP507-201ENST00000363603 121 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CX3CR1P49238 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CX3CR1P49238 ST13P16-201ENST00000401760 781 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 EIF4A1P3-201ENST00000411521 244 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.15□□□□□ -1.75
CX3CR1P49238 RPA2P2-201ENST00000419698 796 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 AC004448.2-201ENST00000422360 586 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 RBMY2QP-201ENST00000429799 1147 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.15□□□□□ -1.75
CX3CR1P49238 AL353597.2-202ENST00000434901 373 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 TDGF1P1-201ENST00000445734 527 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 AC104651.2-201ENST00000447549 528 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 TRY2P-201ENST00000448860 689 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.15□□□□□ -1.75
CX3CR1P49238 EIF4A1P11-201ENST00000451239 222 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 AC010733.1-201ENST00000451515 401 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 PSMC1P13-201ENST00000458195 985 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 RPL5P13-201ENST00000462840 709 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 RPL23AP37-201ENST00000479658 549 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 METTL15P1-201ENST00000481421 1045 ntBASIC4.15□□□□□ -1.75
CX3CR1P49238 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CX3CR1P49238 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.15□□□□□ -1.75
CX3CR1P49238 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.15□□□□□ -1.75
CX3CR1P49238 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms