Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RORAP35398 AC010132.2-201ENST00000295493 1043 ntBASIC4.6□□□□□ -1.67
RORAP35398 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RORAP35398 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RORAP35398 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RORAP35398 AC093719.1-202ENST00000392735 373 ntBASIC4.6□□□□□ -1.67
RORAP35398 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RORAP35398 RSU1P3-201ENST00000412878 835 ntBASIC4.6□□□□□ -1.67
RORAP35398 QRSL1P2-201ENST00000418582 964 ntBASIC4.6□□□□□ -1.67
RORAP35398 HMGB1P32-201ENST00000425971 565 ntBASIC4.6□□□□□ -1.67
RORAP35398 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.6□□□□□ -1.67
RORAP35398 OR2B7P-201ENST00000429302 934 ntBASIC4.6□□□□□ -1.67
RORAP35398 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.6□□□□□ -1.67
RORAP35398 CASP3P1-201ENST00000446037 609 ntBASIC4.6□□□□□ -1.67
RORAP35398 TPT1P13-201ENST00000449760 499 ntBASIC4.6□□□□□ -1.67
RORAP35398 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.6□□□□□ -1.67
RORAP35398 RPS5P7-201ENST00000456664 608 ntBASIC4.6□□□□□ -1.67
RORAP35398 AL133372.1-201ENST00000493565 745 ntBASIC4.6□□□□□ -1.67
RORAP35398 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.6□□□□□ -1.67
RORAP35398 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.6□□□□□ -1.67
RORAP35398 RNA5SP360-201ENST00000516555 118 ntBASIC4.6□□□□□ -1.67
RORAP35398 AF186190.1-201ENST00000517470 480 ntBASIC4.6□□□□□ -1.67
RORAP35398 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.6□□□□□ -1.67
RORAP35398 NPM1P52-201ENST00000518264 846 ntBASIC4.6□□□□□ -1.67
RORAP35398 AC026688.1-201ENST00000520639 1168 ntBASIC4.6□□□□□ -1.67
RORAP35398 NPM1P6-201ENST00000521088 871 ntBASIC4.6□□□□□ -1.67
RORAP35398 RPL23AP53-201ENST00000521854 457 ntBASIC4.6□□□□□ -1.67
RORAP35398 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.6□□□□□ -1.67
RORAP35398 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.6□□□□□ -1.67
RORAP35398 AP005901.4-201ENST00000577336 569 ntBASIC4.6□□□□□ -1.67
RORAP35398 AP000919.1-201ENST00000582850 985 ntBASIC4.6□□□□□ -1.67
RORAP35398 AC008745.1-201ENST00000604064 271 ntBASIC4.6□□□□□ -1.67
RORAP35398 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RORAP35398 AC009704.2-201ENST00000618739 483 ntBASIC4.6□□□□□ -1.67
RORAP35398 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
RORAP35398 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.6□□□□□ -1.67
RORAP35398 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RORAP35398 MTCO1P22-201ENST00000604619 1360 ntBASIC4.6□□□□□ -1.67
RORAP35398 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.6□□□□□ -1.67
RORAP35398 AC068446.1-201ENST00000556425 1549 ntBASIC4.6□□□□□ -1.67
RORAP35398 AC008758.3-201ENST00000507003 1829 ntBASIC4.6□□□□□ -1.67
RORAP35398 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RORAP35398 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
RORAP35398 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
RORAP35398 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
RORAP35398 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RORAP35398 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.67
RORAP35398 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RORAP35398 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RORAP35398 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.59□□□□□ -1.67
RORAP35398 MIR298-201ENST00000401212 88 ntBASIC4.59□□□□□ -1.67
RORAP35398 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.59□□□□□ -1.67
RORAP35398 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.59□□□□□ -1.67
RORAP35398 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.59□□□□□ -1.67
RORAP35398 MTND4LP13-201ENST00000425022 298 ntBASIC4.59□□□□□ -1.67
RORAP35398 OR2AH1P-201ENST00000425717 928 ntBASIC4.59□□□□□ -1.67
RORAP35398 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.59□□□□□ -1.67
RORAP35398 AC009220.1-201ENST00000451614 275 ntBASIC4.59□□□□□ -1.67
RORAP35398 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.59□□□□□ -1.67
RORAP35398 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.59□□□□□ -1.67
RORAP35398 RPL23AP72-201ENST00000492447 435 ntBASIC4.59□□□□□ -1.67
RORAP35398 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
RORAP35398 AC113430.1-201ENST00000506872 718 ntBASIC4.59□□□□□ -1.67
RORAP35398 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.59□□□□□ -1.67
RORAP35398 HSPD1P11-201ENST00000508643 1702 ntBASIC4.59□□□□□ -1.67
RORAP35398 MTCO3P42-201ENST00000509488 518 ntBASIC4.59□□□□□ -1.67
RORAP35398 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.59□□□□□ -1.67
RORAP35398 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
RORAP35398 TCP11X3P-202ENST00000514289 1254 ntBASIC4.59□□□□□ -1.67
RORAP35398 ENPP7P9-201ENST00000514456 627 ntBASIC4.59□□□□□ -1.67
RORAP35398 MTCO3P39-201ENST00000514812 518 ntBASIC4.59□□□□□ -1.67
RORAP35398 RNA5SP464-201ENST00000516251 108 ntBASIC4.59□□□□□ -1.67
RORAP35398 SNORD116-30-201ENST00000516468 85 ntBASIC4.59□□□□□ -1.67
RORAP35398 ASNSP1-201ENST00000518311 1939 ntBASIC4.59□□□□□ -1.67
RORAP35398 BUD31P1-201ENST00000521828 359 ntBASIC4.59□□□□□ -1.67
RORAP35398 GSTP1P1-201ENST00000548078 319 ntBASIC4.59□□□□□ -1.67
RORAP35398 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.59□□□□□ -1.67
RORAP35398 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.59□□□□□ -1.67
RORAP35398 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RORAP35398 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.59□□□□□ -1.67
RORAP35398 AC090312.1-201ENST00000580637 348 ntBASIC4.59□□□□□ -1.67
RORAP35398 FAM106CP-201ENST00000582212 507 ntBASIC4.59□□□□□ -1.67
RORAP35398 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.59□□□□□ -1.67
RORAP35398 AC022726.1-201ENST00000587475 207 ntBASIC4.59□□□□□ -1.67
RORAP35398 AC098935.2-201ENST00000604222 466 ntBASIC4.59□□□□□ -1.67
RORAP35398 AC133552.5-201ENST00000604266 540 ntBASIC4.59□□□□□ -1.67
RORAP35398 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.59□□□□□ -1.67
RORAP35398 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
RORAP35398 AL022401.1-201ENST00000619498 108 ntBASIC4.59□□□□□ -1.67
RORAP35398 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.59□□□□□ -1.67
RORAP35398 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
RORAP35398 CASC19-204ENST00000641001 2055 ntBASIC4.58□□□□□ -1.68
RORAP35398 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RORAP35398 AC090971.4-201ENST00000560291 1800 ntBASIC4.58□□□□□ -1.68
RORAP35398 AC010928.1-201ENST00000592477 1447 ntBASIC4.58□□□□□ -1.68
RORAP35398 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RORAP35398 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RORAP35398 MIR141-201ENST00000384975 95 ntBASIC4.58□□□□□ -1.68
RORAP35398 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.58□□□□□ -1.68
RORAP35398 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 201.1 ms