Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 VDAC1P9-201ENST00000412766 841 ntBASIC4.42□□□□□ -1.7
SDC1P18827 Z68694.1-201ENST00000413929 841 ntBASIC4.42□□□□□ -1.7
SDC1P18827 AC004074.1-201ENST00000421810 1063 ntBASIC4.42□□□□□ -1.7
SDC1P18827 RNF19BPX-201ENST00000426224 625 ntBASIC4.42□□□□□ -1.7
SDC1P18827 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.42□□□□□ -1.7
SDC1P18827 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.42□□□□□ -1.7
SDC1P18827 RPL21P91-201ENST00000429231 479 ntBASIC4.42□□□□□ -1.7
SDC1P18827 ARL4AP3-201ENST00000441452 574 ntBASIC4.42□□□□□ -1.7
SDC1P18827 BTBD7P2-201ENST00000441962 620 ntBASIC4.42□□□□□ -1.7
SDC1P18827 CEACAMP7-201ENST00000444105 496 ntBASIC4.42□□□□□ -1.7
SDC1P18827 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.42□□□□□ -1.7
SDC1P18827 OR1H1P-201ENST00000448731 937 ntBASIC4.42□□□□□ -1.7
SDC1P18827 AC104629.2-201ENST00000468627 598 ntBASIC4.42□□□□□ -1.7
SDC1P18827 AC022795.1-201ENST00000473808 480 ntBASIC4.42□□□□□ -1.7
SDC1P18827 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.42□□□□□ -1.7
SDC1P18827 RPL36AP41-201ENST00000493820 306 ntBASIC4.42□□□□□ -1.7
SDC1P18827 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.42□□□□□ -1.7
SDC1P18827 AC098799.1-201ENST00000504752 800 ntBASIC4.42□□□□□ -1.7
SDC1P18827 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SDC1P18827 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.42□□□□□ -1.7
SDC1P18827 RNU6-760P-201ENST00000516078 97 ntBASIC4.42□□□□□ -1.7
SDC1P18827 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.42□□□□□ -1.7
SDC1P18827 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.42□□□□□ -1.7
SDC1P18827 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.42□□□□□ -1.7
SDC1P18827 AP001880.2-201ENST00000538233 448 ntBASIC4.42□□□□□ -1.7
SDC1P18827 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SDC1P18827 GSTP1P1-201ENST00000548078 319 ntBASIC4.42□□□□□ -1.7
SDC1P18827 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.42□□□□□ -1.7
SDC1P18827 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.42□□□□□ -1.7
SDC1P18827 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.42□□□□□ -1.7
SDC1P18827 AC009117.1-201ENST00000563948 554 ntBASIC4.42□□□□□ -1.7
SDC1P18827 BGLT3-201ENST00000564523 994 ntBASIC4.42□□□□□ -1.7
SDC1P18827 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.42□□□□□ -1.7
SDC1P18827 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.42□□□□□ -1.7
SDC1P18827 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.42□□□□□ -1.7
SDC1P18827 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.42□□□□□ -1.7
SDC1P18827 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.42□□□□□ -1.7
SDC1P18827 AL606537.1-201ENST00000607258 2011 ntBASIC4.42□□□□□ -1.7
SDC1P18827 AC015802.5-201ENST00000607478 399 ntBASIC4.42□□□□□ -1.7
SDC1P18827 AC003001.2-201ENST00000616294 831 ntBASIC4.42□□□□□ -1.7
SDC1P18827 AC006840.1-201ENST00000623069 542 ntBASIC4.42□□□□□ -1.7
SDC1P18827 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SDC1P18827 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SDC1P18827 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.42□□□□□ -1.7
SDC1P18827 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SDC1P18827 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SDC1P18827 AC092435.4-201ENST00000623012 4159 ntBASIC4.41□□□□□ -1.7
SDC1P18827 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.41□□□□□ -1.7
SDC1P18827 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SDC1P18827 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
SDC1P18827 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.41□□□□□ -1.7
SDC1P18827 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SDC1P18827 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SDC1P18827 RNU6-729P-201ENST00000384399 107 ntBASIC4.41□□□□□ -1.7
SDC1P18827 RNA5SP113-201ENST00000410486 84 ntBASIC4.41□□□□□ -1.7
SDC1P18827 COX6B1P1-201ENST00000415962 213 ntBASIC4.41□□□□□ -1.7
SDC1P18827 AC004448.2-201ENST00000422360 586 ntBASIC4.41□□□□□ -1.7
SDC1P18827 AC093084.1-201ENST00000424233 687 ntBASIC4.41□□□□□ -1.7
SDC1P18827 FAM204CP-201ENST00000424489 642 ntBASIC4.41□□□□□ -1.7
SDC1P18827 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
SDC1P18827 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.41□□□□□ -1.7
SDC1P18827 NRBF2P3-201ENST00000432731 865 ntBASIC4.41□□□□□ -1.7
SDC1P18827 HMGB3P10-201ENST00000434734 572 ntBASIC4.41□□□□□ -1.7
SDC1P18827 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.41□□□□□ -1.7
SDC1P18827 SUMO2P1-206ENST00000445436 284 ntBASIC4.41□□□□□ -1.7
SDC1P18827 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.41□□□□□ -1.7
SDC1P18827 AL935212.3-201ENST00000450729 284 ntBASIC4.41□□□□□ -1.7
SDC1P18827 AC107015.1-201ENST00000466902 747 ntBASIC4.41□□□□□ -1.7
SDC1P18827 RN7SL817P-201ENST00000480777 288 ntBASIC4.41□□□□□ -1.7
SDC1P18827 AC098799.3-201ENST00000506095 438 ntBASIC4.41□□□□□ -1.7
SDC1P18827 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.41□□□□□ -1.7
SDC1P18827 FABP5P6-201ENST00000510588 409 ntBASIC4.41□□□□□ -1.7
SDC1P18827 RNU2-30P-201ENST00000516209 141 ntBASIC4.41□□□□□ -1.7
SDC1P18827 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.41□□□□□ -1.7
SDC1P18827 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.41□□□□□ -1.7
SDC1P18827 RN7SL652P-201ENST00000577769 300 ntBASIC4.41□□□□□ -1.7
SDC1P18827 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.41□□□□□ -1.7
SDC1P18827 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.41□□□□□ -1.7
SDC1P18827 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.41□□□□□ -1.7
SDC1P18827 RPL7P50-201ENST00000600588 727 ntBASIC4.41□□□□□ -1.7
SDC1P18827 SNX6P1-201ENST00000601728 1224 ntBASIC4.41□□□□□ -1.7
SDC1P18827 BMS1P7-201ENST00000602440 1052 ntBASIC4.41□□□□□ -1.7
SDC1P18827 AL135786.2-201ENST00000608422 615 ntBASIC4.41□□□□□ -1.7
SDC1P18827 AL354696.1-201ENST00000614652 497 ntBASIC4.41□□□□□ -1.7
SDC1P18827 uc_338.18-201ENST00000615451 175 ntBASIC4.41□□□□□ -1.7
SDC1P18827 AC019080.5-201ENST00000624891 757 ntBASIC4.41□□□□□ -1.7
SDC1P18827 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SDC1P18827 AL391684.1-202ENST00000641293 1636 ntBASIC4.41□□□□□ -1.7
SDC1P18827 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.41□□□□□ -1.7
SDC1P18827 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.41□□□□□ -1.7
SDC1P18827 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SDC1P18827 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SDC1P18827 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SDC1P18827 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SDC1P18827 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SDC1P18827 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.41□□□□□ -1.7
SDC1P18827 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.41□□□□□ -1.7
SDC1P18827 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SDC1P18827 CASC19-204ENST00000641001 2055 ntBASIC4.41□□□□□ -1.7
SDC1P18827 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms