Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AL355852.1-201ENST00000454081 1771 ntBASIC4.53□□□□□ -1.69
CLDN9O95484 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.69
CLDN9O95484 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN9O95484 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN9O95484 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN9O95484 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CLDN9O95484 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN9O95484 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN9O95484 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN9O95484 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN9O95484 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN9O95484 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN9O95484 AL645927.1-201ENST00000396783 406 ntBASIC4.52□□□□□ -1.69
CLDN9O95484 AL034403.1-201ENST00000399414 885 ntBASIC4.52□□□□□ -1.69
CLDN9O95484 RN7SKP216-201ENST00000411050 312 ntBASIC4.52□□□□□ -1.69
CLDN9O95484 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.52□□□□□ -1.69
CLDN9O95484 COX6B1P1-201ENST00000415962 213 ntBASIC4.52□□□□□ -1.69
CLDN9O95484 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN9O95484 RPL23AP4-201ENST00000427757 463 ntBASIC4.52□□□□□ -1.69
CLDN9O95484 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN9O95484 NRBF2P3-201ENST00000432731 865 ntBASIC4.52□□□□□ -1.69
CLDN9O95484 PPIAP13-201ENST00000434706 478 ntBASIC4.52□□□□□ -1.69
CLDN9O95484 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN9O95484 AL035551.1-201ENST00000446931 348 ntBASIC4.52□□□□□ -1.69
CLDN9O95484 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN9O95484 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.52□□□□□ -1.69
CLDN9O95484 AC022431.1-201ENST00000450941 438 ntBASIC4.52□□□□□ -1.69
CLDN9O95484 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN9O95484 RPL7P16-201ENST00000479738 738 ntBASIC4.52□□□□□ -1.69
CLDN9O95484 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
CLDN9O95484 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN9O95484 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.52□□□□□ -1.69
CLDN9O95484 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.52□□□□□ -1.69
CLDN9O95484 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.52□□□□□ -1.69
CLDN9O95484 EIF1AXP2-201ENST00000555940 413 ntBASIC4.52□□□□□ -1.69
CLDN9O95484 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.52□□□□□ -1.69
CLDN9O95484 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN9O95484 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.52□□□□□ -1.69
CLDN9O95484 AC019131.2-201ENST00000609071 870 ntBASIC4.52□□□□□ -1.69
CLDN9O95484 AP001005.3-201ENST00000622049 129 ntBASIC4.52□□□□□ -1.69
CLDN9O95484 UGT2B26P-201ENST00000508672 1613 ntBASIC4.52□□□□□ -1.69
CLDN9O95484 AC087565.3-202ENST00000642085 1603 ntBASIC4.52□□□□□ -1.69
CLDN9O95484 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN9O95484 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN9O95484 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CLDN9O95484 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN9O95484 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN9O95484 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLDN9O95484 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.52□□□□□ -1.69
CLDN9O95484 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN9O95484 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN9O95484 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN9O95484 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN9O95484 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN9O95484 AC092435.4-201ENST00000623012 4159 ntBASIC4.51□□□□□ -1.69
CLDN9O95484 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CLDN9O95484 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CLDN9O95484 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
CLDN9O95484 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN9O95484 RNU6-1251P-201ENST00000364502 107 ntBASIC4.51□□□□□ -1.69
CLDN9O95484 SNORA51.8-201ENST00000384234 132 ntBASIC4.51□□□□□ -1.69
CLDN9O95484 RN7SKP267-201ENST00000410381 285 ntBASIC4.51□□□□□ -1.69
CLDN9O95484 VDAC1P9-201ENST00000412766 841 ntBASIC4.51□□□□□ -1.69
CLDN9O95484 Z74021.1-201ENST00000423610 407 ntBASIC4.51□□□□□ -1.69
CLDN9O95484 NPM1P26-201ENST00000426339 738 ntBASIC4.51□□□□□ -1.69
CLDN9O95484 AC092017.2-201ENST00000427600 362 ntBASIC4.51□□□□□ -1.69
CLDN9O95484 AC093716.1-201ENST00000435923 377 ntBASIC4.51□□□□□ -1.69
CLDN9O95484 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.51□□□□□ -1.69
CLDN9O95484 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN9O95484 BUD31P2-201ENST00000449374 300 ntBASIC4.51□□□□□ -1.69
CLDN9O95484 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN9O95484 AC098799.3-201ENST00000506095 438 ntBASIC4.51□□□□□ -1.69
CLDN9O95484 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CLDN9O95484 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.51□□□□□ -1.69
CLDN9O95484 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.51□□□□□ -1.69
CLDN9O95484 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN9O95484 AP001880.2-201ENST00000538233 448 ntBASIC4.51□□□□□ -1.69
CLDN9O95484 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN9O95484 AC009117.1-201ENST00000563948 554 ntBASIC4.51□□□□□ -1.69
CLDN9O95484 OR1F2P-201ENST00000570470 933 ntBASIC4.51□□□□□ -1.69
CLDN9O95484 RN7SL652P-201ENST00000577769 300 ntBASIC4.51□□□□□ -1.69
CLDN9O95484 AC209154.1-201ENST00000582156 337 ntBASIC4.51□□□□□ -1.69
CLDN9O95484 HMGB2P1-201ENST00000591146 634 ntBASIC4.51□□□□□ -1.69
CLDN9O95484 AP001542.1-201ENST00000591314 200 ntBASIC4.51□□□□□ -1.69
CLDN9O95484 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN9O95484 AC096553.1-201ENST00000605169 829 ntBASIC4.51□□□□□ -1.69
CLDN9O95484 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN9O95484 Mico1.1-201ENST00000611698 204 ntBASIC4.51□□□□□ -1.69
CLDN9O95484 AL391597.1-201ENST00000618707 694 ntBASIC4.51□□□□□ -1.69
CLDN9O95484 AL133370.2-201ENST00000619934 439 ntBASIC4.51□□□□□ -1.69
CLDN9O95484 AC068870.2-201ENST00000620635 389 ntBASIC4.51□□□□□ -1.69
CLDN9O95484 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN9O95484 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN9O95484 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN9O95484 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN9O95484 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN9O95484 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN9O95484 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN9O95484 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.5□□□□□ -1.69
CLDN9O95484 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms