Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AP003485.2-201ENST00000623636 610 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 AC112694.2-201ENST00000623697 768 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.55□□□□□ -1.68
LMX1BO60663 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.55□□□□□ -1.68
LMX1BO60663 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LMX1BO60663 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.55□□□□□ -1.68
LMX1BO60663 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.55□□□□□ -1.68
LMX1BO60663 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LMX1BO60663 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LMX1BO60663 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.54□□□□□ -1.68
LMX1BO60663 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.54□□□□□ -1.68
LMX1BO60663 MTND4P8-201ENST00000514997 1362 ntBASIC4.54□□□□□ -1.68
LMX1BO60663 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LMX1BO60663 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LMX1BO60663 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.54□□□□□ -1.68
LMX1BO60663 RNU5B-4P-201ENST00000363508 111 ntBASIC4.54□□□□□ -1.68
LMX1BO60663 RN7SKP153-201ENST00000365026 316 ntBASIC4.54□□□□□ -1.68
LMX1BO60663 RNA5SP223-201ENST00000365174 120 ntBASIC4.54□□□□□ -1.68
LMX1BO60663 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.54□□□□□ -1.68
LMX1BO60663 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LMX1BO60663 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LMX1BO60663 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LMX1BO60663 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LMX1BO60663 MIR105-1-201ENST00000385222 81 ntBASIC4.54□□□□□ -1.68
LMX1BO60663 GAPDHP15-201ENST00000398586 975 ntBASIC4.54□□□□□ -1.68
LMX1BO60663 MTATP6P20-201ENST00000414147 562 ntBASIC4.54□□□□□ -1.68
LMX1BO60663 KRR1P1-201ENST00000419430 803 ntBASIC4.54□□□□□ -1.68
LMX1BO60663 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.54□□□□□ -1.68
LMX1BO60663 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.54□□□□□ -1.68
LMX1BO60663 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.54□□□□□ -1.68
LMX1BO60663 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.54□□□□□ -1.68
LMX1BO60663 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.54□□□□□ -1.68
LMX1BO60663 GAPDHP25-201ENST00000447061 1001 ntBASIC4.54□□□□□ -1.68
LMX1BO60663 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.54□□□□□ -1.68
LMX1BO60663 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.54□□□□□ -1.68
LMX1BO60663 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LMX1BO60663 RN7SL189P-201ENST00000468631 289 ntBASIC4.54□□□□□ -1.68
LMX1BO60663 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LMX1BO60663 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.54□□□□□ -1.68
LMX1BO60663 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.54□□□□□ -1.68
LMX1BO60663 RNU6-276P-201ENST00000516114 96 ntBASIC4.54□□□□□ -1.68
LMX1BO60663 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.54□□□□□ -1.68
LMX1BO60663 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.54□□□□□ -1.68
LMX1BO60663 AP001922.4-201ENST00000526967 290 ntBASIC4.54□□□□□ -1.68
LMX1BO60663 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.54□□□□□ -1.68
LMX1BO60663 CR383656.6-201ENST00000550518 394 ntBASIC4.54□□□□□ -1.68
LMX1BO60663 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
LMX1BO60663 OR4U1P-201ENST00000554958 912 ntBASIC4.54□□□□□ -1.68
LMX1BO60663 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.54□□□□□ -1.68
LMX1BO60663 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.54□□□□□ -1.68
LMX1BO60663 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.54□□□□□ -1.68
LMX1BO60663 DUXAP3-201ENST00000603616 594 ntBASIC4.54□□□□□ -1.68
LMX1BO60663 AC008814.1-201ENST00000603797 406 ntBASIC4.54□□□□□ -1.68
LMX1BO60663 AC005252.1-201ENST00000604518 1063 ntBASIC4.54□□□□□ -1.68
LMX1BO60663 AC099785.1-201ENST00000605697 437 ntBASIC4.54□□□□□ -1.68
LMX1BO60663 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.54□□□□□ -1.68
LMX1BO60663 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
LMX1BO60663 AC026422.1-201ENST00000623961 452 ntBASIC4.54□□□□□ -1.68
LMX1BO60663 AP002967.1-201ENST00000624203 539 ntBASIC4.54□□□□□ -1.68
LMX1BO60663 AC019080.5-201ENST00000624891 757 ntBASIC4.54□□□□□ -1.68
LMX1BO60663 AC006927.2-201ENST00000639256 389 ntBASIC4.54□□□□□ -1.68
LMX1BO60663 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LMX1BO60663 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
LMX1BO60663 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LMX1BO60663 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LMX1BO60663 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LMX1BO60663 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.54□□□□□ -1.68
LMX1BO60663 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LMX1BO60663 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.54□□□□□ -1.68
LMX1BO60663 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
LMX1BO60663 THAP12P5-201ENST00000405864 2275 ntBASIC4.53□□□□□ -1.68
LMX1BO60663 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LMX1BO60663 AC100778.3-201ENST00000580060 1750 ntBASIC4.53□□□□□ -1.68
LMX1BO60663 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LMX1BO60663 Z95331.1-201ENST00000623075 23112 ntBASIC4.53□□□□□ -1.68
LMX1BO60663 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.53□□□□□ -1.68
LMX1BO60663 RNU1-146P-201ENST00000364015 165 ntBASIC4.53□□□□□ -1.68
LMX1BO60663 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
LMX1BO60663 AC234772.1-201ENST00000377927 937 ntBASIC4.53□□□□□ -1.68
LMX1BO60663 RNU1-106P-201ENST00000384382 164 ntBASIC4.53□□□□□ -1.68
LMX1BO60663 RNY3P9-201ENST00000384727 106 ntBASIC4.53□□□□□ -1.68
LMX1BO60663 RNA5SP339-201ENST00000390987 122 ntBASIC4.53□□□□□ -1.68
LMX1BO60663 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LMX1BO60663 MTCO2P31-201ENST00000402702 684 ntBASIC4.53□□□□□ -1.68
LMX1BO60663 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.53□□□□□ -1.68
LMX1BO60663 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.53□□□□□ -1.68
LMX1BO60663 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LMX1BO60663 ARF4P4-201ENST00000439608 520 ntBASIC4.53□□□□□ -1.68
LMX1BO60663 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.53□□□□□ -1.68
LMX1BO60663 MTCYBP21-201ENST00000443300 1113 ntBASIC4.53□□□□□ -1.68
LMX1BO60663 CCRL1P1-201ENST00000449542 1053 ntBASIC4.53□□□□□ -1.68
LMX1BO60663 Z99714.1-201ENST00000450463 807 ntBASIC4.53□□□□□ -1.68
LMX1BO60663 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.53□□□□□ -1.68
LMX1BO60663 RPS17P11-201ENST00000474297 293 ntBASIC4.53□□□□□ -1.68
LMX1BO60663 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.53□□□□□ -1.68
LMX1BO60663 AP000563.1-201ENST00000490865 758 ntBASIC4.53□□□□□ -1.68
LMX1BO60663 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.53□□□□□ -1.68
LMX1BO60663 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.53□□□□□ -1.68
LMX1BO60663 AC105313.1-201ENST00000509121 353 ntBASIC4.53□□□□□ -1.68
LMX1BO60663 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms