Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PRKNO60260 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PRKNO60260 RNU6-252P-201ENST00000363232 107 ntBASIC4.62□□□□□ -1.67
PRKNO60260 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
PRKNO60260 AL672167.2-201ENST00000377164 879 ntBASIC4.62□□□□□ -1.67
PRKNO60260 RNU6-481P-201ENST00000384194 107 ntBASIC4.62□□□□□ -1.67
PRKNO60260 RPL22P22-201ENST00000395439 379 ntBASIC4.62□□□□□ -1.67
PRKNO60260 AP002530.1-201ENST00000405705 684 ntBASIC4.62□□□□□ -1.67
PRKNO60260 COX5BP7-201ENST00000414780 274 ntBASIC4.62□□□□□ -1.67
PRKNO60260 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PRKNO60260 AC006065.1-201ENST00000422539 802 ntBASIC4.62□□□□□ -1.67
PRKNO60260 FO393414.1-201ENST00000428697 1184 ntBASIC4.62□□□□□ -1.67
PRKNO60260 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.62□□□□□ -1.67
PRKNO60260 AL138787.1-202ENST00000437804 898 ntBASIC4.62□□□□□ -1.67
PRKNO60260 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.62□□□□□ -1.67
PRKNO60260 AC073052.1-201ENST00000440417 714 ntBASIC4.62□□□□□ -1.67
PRKNO60260 AC112498.1-201ENST00000444401 332 ntBASIC4.62□□□□□ -1.67
PRKNO60260 RPL31P44-201ENST00000447680 377 ntBASIC4.62□□□□□ -1.67
PRKNO60260 CBX1P2-201ENST00000453841 458 ntBASIC4.62□□□□□ -1.67
PRKNO60260 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.62□□□□□ -1.67
PRKNO60260 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.62□□□□□ -1.67
PRKNO60260 snoU109.3-201ENST00000459477 145 ntBASIC4.62□□□□□ -1.67
PRKNO60260 RPS3AP41-201ENST00000462701 778 ntBASIC4.62□□□□□ -1.67
PRKNO60260 RN7SL441P-201ENST00000492388 296 ntBASIC4.62□□□□□ -1.67
PRKNO60260 RNA5SP392-201ENST00000516905 112 ntBASIC4.62□□□□□ -1.67
PRKNO60260 AC010476.1-201ENST00000519111 851 ntBASIC4.62□□□□□ -1.67
PRKNO60260 BUD31P1-201ENST00000521828 359 ntBASIC4.62□□□□□ -1.67
PRKNO60260 AP006245.2-201ENST00000522004 300 ntBASIC4.62□□□□□ -1.67
PRKNO60260 AP000859.1-201ENST00000525536 307 ntBASIC4.62□□□□□ -1.67
PRKNO60260 AC021006.3-201ENST00000530771 192 ntBASIC4.62□□□□□ -1.67
PRKNO60260 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
PRKNO60260 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.62□□□□□ -1.67
PRKNO60260 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.62□□□□□ -1.67
PRKNO60260 NDUFB4P11-201ENST00000560510 395 ntBASIC4.62□□□□□ -1.67
PRKNO60260 AC040958.1-201ENST00000561102 201 ntBASIC4.62□□□□□ -1.67
PRKNO60260 AC069431.2-201ENST00000604149 1099 ntBASIC4.62□□□□□ -1.67
PRKNO60260 AC021851.1-201ENST00000608537 1082 ntBASIC4.62□□□□□ -1.67
PRKNO60260 FAM25E-202ENST00000608562 189 ntBASIC4.62□□□□□ -1.67
PRKNO60260 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.62□□□□□ -1.67
PRKNO60260 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.62□□□□□ -1.67
PRKNO60260 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PRKNO60260 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PRKNO60260 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PRKNO60260 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.62□□□□□ -1.67
PRKNO60260 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PRKNO60260 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
PRKNO60260 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
PRKNO60260 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PRKNO60260 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.61□□□□□ -1.67
PRKNO60260 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PRKNO60260 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PRKNO60260 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PRKNO60260 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PRKNO60260 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PRKNO60260 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PRKNO60260 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
PRKNO60260 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PRKNO60260 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PRKNO60260 RNA5SP191-201ENST00000362585 102 ntBASIC4.61□□□□□ -1.67
PRKNO60260 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PRKNO60260 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PRKNO60260 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.61□□□□□ -1.67
PRKNO60260 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.61□□□□□ -1.67
PRKNO60260 LRRC37BP1-201ENST00000398851 714 ntBASIC4.61□□□□□ -1.67
PRKNO60260 MIR937-201ENST00000401271 86 ntBASIC4.61□□□□□ -1.67
PRKNO60260 AL355615.1-201ENST00000406187 641 ntBASIC4.61□□□□□ -1.67
PRKNO60260 RPS3AP25-201ENST00000411660 793 ntBASIC4.61□□□□□ -1.67
PRKNO60260 MTCO2P8-201ENST00000412213 658 ntBASIC4.61□□□□□ -1.67
PRKNO60260 AL445183.3-201ENST00000414168 502 ntBASIC4.61□□□□□ -1.67
PRKNO60260 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PRKNO60260 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.61□□□□□ -1.67
PRKNO60260 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PRKNO60260 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.61□□□□□ -1.67
PRKNO60260 HMGB1P26-201ENST00000452520 628 ntBASIC4.61□□□□□ -1.67
PRKNO60260 AL645937.3-201ENST00000453647 936 ntBASIC4.61□□□□□ -1.67
PRKNO60260 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.61□□□□□ -1.67
PRKNO60260 DUXAP8-207ENST00000456786 622 ntBASIC4.61□□□□□ -1.67
PRKNO60260 RPS17P2-201ENST00000461663 408 ntBASIC4.61□□□□□ -1.67
PRKNO60260 RPL7P16-201ENST00000479738 738 ntBASIC4.61□□□□□ -1.67
PRKNO60260 AC105233.1-201ENST00000498840 781 ntBASIC4.61□□□□□ -1.67
PRKNO60260 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.61□□□□□ -1.67
PRKNO60260 AC096571.1-202ENST00000506634 735 ntBASIC4.61□□□□□ -1.67
PRKNO60260 SUMO2P5-201ENST00000506790 245 ntBASIC4.61□□□□□ -1.67
PRKNO60260 AC069306.1-201ENST00000507006 843 ntBASIC4.61□□□□□ -1.67
PRKNO60260 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.61□□□□□ -1.67
PRKNO60260 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.61□□□□□ -1.67
PRKNO60260 AC021451.1-201ENST00000523498 1129 ntBASIC4.61□□□□□ -1.67
PRKNO60260 CIR1P1-201ENST00000524055 1133 ntBASIC4.61□□□□□ -1.67
PRKNO60260 OR5D15P-201ENST00000531671 942 ntBASIC4.61□□□□□ -1.67
PRKNO60260 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.61□□□□□ -1.67
PRKNO60260 AC023825.1-201ENST00000566704 1030 ntBASIC4.61□□□□□ -1.67
PRKNO60260 MIR3934-201ENST00000579806 107 ntBASIC4.61□□□□□ -1.67
PRKNO60260 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.61□□□□□ -1.67
PRKNO60260 AC011487.3-201ENST00000593607 453 ntBASIC4.61□□□□□ -1.67
PRKNO60260 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.61□□□□□ -1.67
PRKNO60260 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.61□□□□□ -1.67
PRKNO60260 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.61□□□□□ -1.67
PRKNO60260 AC124016.2-201ENST00000610058 665 ntBASIC4.61□□□□□ -1.67
PRKNO60260 Z95327.3-201ENST00000610385 572 ntBASIC4.61□□□□□ -1.67
PRKNO60260 DUXAP10-204ENST00000612052 616 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms