Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RIPK2O43353 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RIPK2O43353 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RIPK2O43353 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RIPK2O43353 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RIPK2O43353 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RIPK2O43353 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RIPK2O43353 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RIPK2O43353 Z97832.1-201ENST00000402490 328 ntBASIC4.79□□□□□ -1.64
RIPK2O43353 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.79□□□□□ -1.64
RIPK2O43353 RN7SKP167-201ENST00000411047 285 ntBASIC4.79□□□□□ -1.64
RIPK2O43353 RNA5SP498-201ENST00000411342 120 ntBASIC4.79□□□□□ -1.64
RIPK2O43353 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.79□□□□□ -1.64
RIPK2O43353 GTF2IP5-201ENST00000414608 731 ntBASIC4.79□□□□□ -1.64
RIPK2O43353 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.79□□□□□ -1.64
RIPK2O43353 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.79□□□□□ -1.64
RIPK2O43353 AC245047.2-201ENST00000441060 530 ntBASIC4.79□□□□□ -1.64
RIPK2O43353 SPRYD7P1-201ENST00000443861 570 ntBASIC4.79□□□□□ -1.64
RIPK2O43353 AL389915.2-201ENST00000454576 441 ntBASIC4.79□□□□□ -1.64
RIPK2O43353 EIF2S2P5-201ENST00000457635 968 ntBASIC4.79□□□□□ -1.64
RIPK2O43353 RN7SL319P-201ENST00000480656 221 ntBASIC4.79□□□□□ -1.64
RIPK2O43353 PPIAP19-201ENST00000486414 492 ntBASIC4.79□□□□□ -1.64
RIPK2O43353 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RIPK2O43353 RN7SL649P-201ENST00000496974 275 ntBASIC4.79□□□□□ -1.64
RIPK2O43353 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.79□□□□□ -1.64
RIPK2O43353 NDUFB4P12-201ENST00000513465 390 ntBASIC4.79□□□□□ -1.64
RIPK2O43353 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RIPK2O43353 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.79□□□□□ -1.64
RIPK2O43353 GLRXP2-201ENST00000555594 321 ntBASIC4.79□□□□□ -1.64
RIPK2O43353 AC011447.4-201ENST00000587562 111 ntBASIC4.79□□□□□ -1.64
RIPK2O43353 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.79□□□□□ -1.64
RIPK2O43353 MEMO1P5-201ENST00000604810 406 ntBASIC4.79□□□□□ -1.64
RIPK2O43353 AP004372.1-201ENST00000604842 844 ntBASIC4.79□□□□□ -1.64
RIPK2O43353 AC126915.2-201ENST00000610957 190 ntBASIC4.79□□□□□ -1.64
RIPK2O43353 AL353726.1-201ENST00000614041 1000 ntBASIC4.79□□□□□ -1.64
RIPK2O43353 AC016957.2-201ENST00000616998 848 ntBASIC4.79□□□□□ -1.64
RIPK2O43353 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.79□□□□□ -1.64
RIPK2O43353 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RIPK2O43353 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RIPK2O43353 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.79□□□□□ -1.64
RIPK2O43353 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.79□□□□□ -1.64
RIPK2O43353 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.79□□□□□ -1.64
RIPK2O43353 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RIPK2O43353 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RIPK2O43353 AC096656.1-201ENST00000623826 1364 ntBASIC4.78□□□□□ -1.64
RIPK2O43353 AC009951.1-201ENST00000623674 2614 ntBASIC4.78□□□□□ -1.64
RIPK2O43353 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RIPK2O43353 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RIPK2O43353 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RIPK2O43353 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RIPK2O43353 AC017002.4-201ENST00000604721 1525 ntBASIC4.78□□□□□ -1.64
RIPK2O43353 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.78□□□□□ -1.64
RIPK2O43353 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RIPK2O43353 THAP12P4-201ENST00000528321 2266 ntBASIC4.78□□□□□ -1.64
RIPK2O43353 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RIPK2O43353 RNA5SP455-201ENST00000365190 119 ntBASIC4.78□□□□□ -1.64
RIPK2O43353 GSTA12P-201ENST00000402398 508 ntBASIC4.78□□□□□ -1.64
RIPK2O43353 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RIPK2O43353 AC009965.2-201ENST00000425328 970 ntBASIC4.78□□□□□ -1.64
RIPK2O43353 RPL21P91-201ENST00000429231 479 ntBASIC4.78□□□□□ -1.64
RIPK2O43353 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.78□□□□□ -1.64
RIPK2O43353 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RIPK2O43353 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.78□□□□□ -1.64
RIPK2O43353 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.78□□□□□ -1.64
RIPK2O43353 MTCYBP12-201ENST00000440559 1134 ntBASIC4.78□□□□□ -1.64
RIPK2O43353 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.78□□□□□ -1.64
RIPK2O43353 AC073587.1-201ENST00000447093 876 ntBASIC4.78□□□□□ -1.64
RIPK2O43353 AL162388.1-201ENST00000450912 352 ntBASIC4.78□□□□□ -1.64
RIPK2O43353 RPL7P39-201ENST00000481157 744 ntBASIC4.78□□□□□ -1.64
RIPK2O43353 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.78□□□□□ -1.64
RIPK2O43353 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.78□□□□□ -1.64
RIPK2O43353 AC024558.1-201ENST00000505008 528 ntBASIC4.78□□□□□ -1.64
RIPK2O43353 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.78□□□□□ -1.64
RIPK2O43353 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.78□□□□□ -1.64
RIPK2O43353 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.78□□□□□ -1.64
RIPK2O43353 AC021146.7-201ENST00000509604 775 ntBASIC4.78□□□□□ -1.64
RIPK2O43353 AC067904.2-201ENST00000517322 1283 ntBASIC4.78□□□□□ -1.64
RIPK2O43353 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.78□□□□□ -1.64
RIPK2O43353 AC100770.1-201ENST00000532310 322 ntBASIC4.78□□□□□ -1.64
RIPK2O43353 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.78□□□□□ -1.64
RIPK2O43353 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.78□□□□□ -1.64
RIPK2O43353 RN7SL802P-201ENST00000577858 299 ntBASIC4.78□□□□□ -1.64
RIPK2O43353 MIR5699-201ENST00000578903 90 ntBASIC4.78□□□□□ -1.64
RIPK2O43353 AC022884.3-201ENST00000579571 248 ntBASIC4.78□□□□□ -1.64
RIPK2O43353 SNORD95-201ENST00000579879 68 ntBASIC4.78□□□□□ -1.64
RIPK2O43353 MIR4691-201ENST00000583764 85 ntBASIC4.78□□□□□ -1.64
RIPK2O43353 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.78□□□□□ -1.64
RIPK2O43353 AC011453.2-201ENST00000603737 729 ntBASIC4.78□□□□□ -1.64
RIPK2O43353 AC123768.4-201ENST00000616244 701 ntBASIC4.78□□□□□ -1.64
RIPK2O43353 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RIPK2O43353 MIR7154-201ENST00000620673 73 ntBASIC4.78□□□□□ -1.64
RIPK2O43353 AP006248.2-201ENST00000623309 592 ntBASIC4.78□□□□□ -1.64
RIPK2O43353 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.78□□□□□ -1.64
RIPK2O43353 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RIPK2O43353 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.78□□□□□ -1.64
RIPK2O43353 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RIPK2O43353 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RIPK2O43353 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RIPK2O43353 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RIPK2O43353 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms