Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CUX2O14529 ANAPC1P1-201ENST00000426186 2145 ntBASIC7.86□□□□□ -1.15
CUX2O14529 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
CUX2O14529 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CUX2O14529 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CUX2O14529 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CUX2O14529 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC7.86□□□□□ -1.15
CUX2O14529 AC096664.2-201ENST00000411843 406 ntBASIC7.86□□□□□ -1.15
CUX2O14529 TCEA1P4-201ENST00000415066 844 ntBASIC7.86□□□□□ -1.15
CUX2O14529 AC236972.1-201ENST00000433225 199 ntBASIC7.86□□□□□ -1.15
CUX2O14529 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC7.86□□□□□ -1.15
CUX2O14529 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CUX2O14529 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC7.86□□□□□ -1.15
CUX2O14529 AL031658.2-201ENST00000616850 651 ntBASIC7.86□□□□□ -1.15
CUX2O14529 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC7.86□□□□□ -1.15
CUX2O14529 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CUX2O14529 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CUX2O14529 AC018628.1-201ENST00000624147 3819 ntBASIC7.85□□□□□ -1.15
CUX2O14529 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CUX2O14529 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CUX2O14529 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
CUX2O14529 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.85□□□□□ -1.15
CUX2O14529 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CUX2O14529 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CUX2O14529 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.85□□□□□ -1.15
CUX2O14529 AC004944.1-201ENST00000517807 3059 ntBASIC7.85□□□□□ -1.15
CUX2O14529 MGP-201ENST00000228938 694 ntTSL 3 BASIC7.85□□□□□ -1.15
CUX2O14529 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
CUX2O14529 OR6C71P-201ENST00000432580 913 ntBASIC7.85□□□□□ -1.15
CUX2O14529 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC7.85□□□□□ -1.15
CUX2O14529 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC7.85□□□□□ -1.15
CUX2O14529 PLGLA-201ENST00000465668 449 ntBASIC7.85□□□□□ -1.15
CUX2O14529 AC007688.1-201ENST00000475592 759 ntBASIC7.85□□□□□ -1.15
CUX2O14529 RN7SL691P-201ENST00000494487 301 ntBASIC7.85□□□□□ -1.15
CUX2O14529 AC093815.1-201ENST00000508637 280 ntBASIC7.85□□□□□ -1.15
CUX2O14529 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC7.85□□□□□ -1.15
CUX2O14529 MIMT1-201ENST00000597105 1050 ntBASIC7.85□□□□□ -1.15
CUX2O14529 KC877982.1-201ENST00000602313 470 ntBASIC7.85□□□□□ -1.15
CUX2O14529 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
CUX2O14529 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.85□□□□□ -1.15
CUX2O14529 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
CUX2O14529 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CUX2O14529 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CUX2O14529 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CUX2O14529 VN1R51P-201ENST00000411675 945 ntBASIC7.84□□□□□ -1.15
CUX2O14529 RPS21P8-201ENST00000413365 247 ntBASIC7.84□□□□□ -1.15
CUX2O14529 ABCF2P2-201ENST00000450549 296 ntBASIC7.84□□□□□ -1.15
CUX2O14529 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
CUX2O14529 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CUX2O14529 RPL35P6-201ENST00000490024 372 ntBASIC7.84□□□□□ -1.15
CUX2O14529 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC7.84□□□□□ -1.15
CUX2O14529 PYM1-205ENST00000547925 499 ntTSL 3 BASIC7.84□□□□□ -1.15
CUX2O14529 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC7.84□□□□□ -1.15
CUX2O14529 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC7.84□□□□□ -1.15
CUX2O14529 SNORA74C-1-201ENST00000580726 201 ntBASIC7.84□□□□□ -1.15
CUX2O14529 AC113403.1-201ENST00000604910 193 ntBASIC7.84□□□□□ -1.15
CUX2O14529 OR7A19P-201ENST00000608051 733 ntBASIC7.84□□□□□ -1.15
CUX2O14529 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CUX2O14529 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CUX2O14529 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CUX2O14529 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
CUX2O14529 MTND6P5-201ENST00000448266 512 ntBASIC7.83□□□□□ -1.16
CUX2O14529 IFITM8P-201ENST00000522529 394 ntBASIC7.83□□□□□ -1.16
CUX2O14529 AC005412.1-201ENST00000580812 1049 ntBASIC7.83□□□□□ -1.16
CUX2O14529 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC7.83□□□□□ -1.16
CUX2O14529 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC7.83□□□□□ -1.16
CUX2O14529 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CUX2O14529 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CUX2O14529 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CUX2O14529 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
CUX2O14529 VN2R3P-201ENST00000422626 1412 ntBASIC7.83□□□□□ -1.16
CUX2O14529 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
CUX2O14529 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
CUX2O14529 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
CUX2O14529 AL450345.1-202ENST00000605741 3881 ntBASIC7.82□□□□□ -1.16
CUX2O14529 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CUX2O14529 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC7.82□□□□□ -1.16
CUX2O14529 OR8F1P-201ENST00000425243 930 ntBASIC7.82□□□□□ -1.16
CUX2O14529 AC091286.1-201ENST00000431233 461 ntBASIC7.82□□□□□ -1.16
CUX2O14529 MRPL50P1-201ENST00000431951 384 ntBASIC7.82□□□□□ -1.16
CUX2O14529 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC7.82□□□□□ -1.16
CUX2O14529 NOTCH2P1-201ENST00000443481 624 ntBASIC7.82□□□□□ -1.16
CUX2O14529 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC7.82□□□□□ -1.16
CUX2O14529 RPL6P9-201ENST00000466502 859 ntBASIC7.82□□□□□ -1.16
CUX2O14529 AC025164.1-201ENST00000496249 478 ntBASIC7.82□□□□□ -1.16
CUX2O14529 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC7.82□□□□□ -1.16
CUX2O14529 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC7.82□□□□□ -1.16
CUX2O14529 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC7.82□□□□□ -1.16
CUX2O14529 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC7.82□□□□□ -1.16
CUX2O14529 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC7.82□□□□□ -1.16
CUX2O14529 OR6C71P-202ENST00000641886 1107 ntBASIC7.82□□□□□ -1.16
CUX2O14529 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC7.82□□□□□ -1.16
CUX2O14529 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC7.82□□□□□ -1.16
CUX2O14529 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CUX2O14529 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
CUX2O14529 AP001029.2-203ENST00000589795 4910 ntBASIC7.82□□□□□ -1.16
CUX2O14529 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
CUX2O14529 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
CUX2O14529 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC7.82□□□□□ -1.16
CUX2O14529 RAB9AP3-201ENST00000412737 573 ntBASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 932.8 ms