Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 AC112694.2-201ENST00000623697 768 ntBASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 AP003497.2-201ENST00000624220 967 ntBASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 FRG1DP-201ENST00000635586 771 ntBASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 TRIM51GP-201ENST00000534741 1350 ntBASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA3F8WFD2 AC007996.1-201ENST00000620414 2821 ntBASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 RNA5SP428-201ENST00000365129 132 ntBASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 OR6K3-202ENST00000368146 996 ntBASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 BMS1P3-201ENST00000372011 932 ntBASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 Z97832.1-201ENST00000402490 328 ntBASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 AL035079.1-201ENST00000405210 287 ntBASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 RNA5SP498-201ENST00000411342 120 ntBASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 FABP7P2-201ENST00000429946 379 ntBASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 AC009238.2-201ENST00000431026 355 ntBASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 AC092324.1-201ENST00000468671 324 ntBASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 NPM1P17-201ENST00000479221 602 ntBASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 RN7SL591P-201ENST00000496150 292 ntBASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 AC025459.1-201ENST00000504072 156 ntBASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 BTF3P13-201ENST00000513224 490 ntBASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 snoU109.6-201ENST00000516831 118 ntBASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 AC008083.2-201ENST00000546707 476 ntBASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 NMNAT1P1-201ENST00000554095 876 ntBASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 AC005776.1-201ENST00000603164 290 ntBASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 AC105254.2-201ENST00000603636 436 ntBASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 AC087283.1-201ENST00000604029 1074 ntBASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 AC087385.3-201ENST00000620477 187 ntBASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 AC104260.2-201ENST00000623551 3497 ntBASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA3F8WFD2 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
NPIPA3F8WFD2 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
NPIPA3F8WFD2 AC063976.2-201ENST00000425667 3556 ntBASIC4.59□□□□□ -1.68
NPIPA3F8WFD2 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.59□□□□□ -1.68
NPIPA3F8WFD2 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 RN7SKP149-201ENST00000363008 344 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 RPS27AP11-201ENST00000402798 447 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 RNU4-74P-201ENST00000411280 161 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 AC105402.1-201ENST00000413336 545 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms