Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC6.96□□□□□ -1.3
CUEDC1Q9NWM3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC6.96□□□□□ -1.3
CUEDC1Q9NWM3 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.96□□□□□ -1.3
CUEDC1Q9NWM3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC6.96□□□□□ -1.3
CUEDC1Q9NWM3 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.96□□□□□ -1.3
CUEDC1Q9NWM3 RPSAP66-201ENST00000592196 606 ntBASIC6.96□□□□□ -1.3
CUEDC1Q9NWM3 AL589863.1-201ENST00000595383 631 ntBASIC6.96□□□□□ -1.3
CUEDC1Q9NWM3 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC6.96□□□□□ -1.3
CUEDC1Q9NWM3 AP006248.2-201ENST00000623309 592 ntBASIC6.96□□□□□ -1.3
CUEDC1Q9NWM3 AC211433.3-201ENST00000623770 375 ntBASIC6.96□□□□□ -1.3
CUEDC1Q9NWM3 AC100810.6-201ENST00000638068 285 ntBASIC6.96□□□□□ -1.3
CUEDC1Q9NWM3 CASC19-212ENST00000641153 1287 ntBASIC6.96□□□□□ -1.3
CUEDC1Q9NWM3 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.96□□□□□ -1.3
CUEDC1Q9NWM3 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
CUEDC1Q9NWM3 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.96□□□□□ -1.3
CUEDC1Q9NWM3 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CUEDC1Q9NWM3 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.96□□□□□ -1.3
CUEDC1Q9NWM3 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CUEDC1Q9NWM3 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CUEDC1Q9NWM3 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CUEDC1Q9NWM3 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
CUEDC1Q9NWM3 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AL161912.4-201ENST00000623889 2468 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC125232.1-201ENST00000452554 1408 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC010928.1-201ENST00000592477 1447 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 SPATA31C2-201ENST00000324915 3777 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 U8.3-201ENST00000363321 132 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 RNA5SP429-201ENST00000363688 109 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 RNU6-74P-201ENST00000384235 107 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 Y_RNA.476-201ENST00000384347 108 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 RNU6-505P-201ENST00000384427 107 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 MIR217-201ENST00000384817 110 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 RNU6-1055P-201ENST00000391085 107 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AL162578.1-201ENST00000406202 378 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 RNU6-77P-201ENST00000410554 91 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AL359704.1-201ENST00000411586 781 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC113618.1-201ENST00000416747 285 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AP001324.1-201ENST00000428553 399 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 NANOGP6-201ENST00000429190 847 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 DBIL5P2-201ENST00000443827 253 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 COX6CP18-201ENST00000448769 222 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC019080.2-201ENST00000453859 394 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 MTND1P12-201ENST00000455231 147 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 RPL23AP12-201ENST00000467573 473 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 RPL7P39-201ENST00000481157 744 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 MTND1P3-201ENST00000484956 952 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC025271.1-201ENST00000485045 429 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC079594.1-201ENST00000489757 331 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 MRPL57P6-201ENST00000506570 309 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 RPL7L1P13-201ENST00000511702 739 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC120036.3-201ENST00000517826 292 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC068587.4-201ENST00000533893 186 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 MIR4307-201ENST00000582802 84 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 RN7SL667P-201ENST00000582817 298 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC061975.3-201ENST00000583209 244 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC010591.1-201ENST00000603941 649 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC009597.2-201ENST00000604659 592 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AL627309.6-201ENST00000606857 840 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC012510.1-201ENST00000607946 759 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 AC009779.8-202ENST00000607990 932 ntBASIC6.95□□□□□ -1.3
CUEDC1Q9NWM3 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms