Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.74□□□□□ -1.65
CISHQ9NSE2 BTG4P1-201ENST00000510421 183 ntBASIC4.74□□□□□ -1.65
CISHQ9NSE2 RNU6-1334P-201ENST00000516032 105 ntBASIC4.74□□□□□ -1.65
CISHQ9NSE2 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.74□□□□□ -1.65
CISHQ9NSE2 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.74□□□□□ -1.65
CISHQ9NSE2 CR383656.6-201ENST00000550518 394 ntBASIC4.74□□□□□ -1.65
CISHQ9NSE2 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CISHQ9NSE2 RPL21P7-201ENST00000557463 483 ntBASIC4.74□□□□□ -1.65
CISHQ9NSE2 AL160290.3-201ENST00000604869 165 ntBASIC4.74□□□□□ -1.65
CISHQ9NSE2 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.74□□□□□ -1.65
CISHQ9NSE2 AL353726.1-201ENST00000614041 1000 ntBASIC4.74□□□□□ -1.65
CISHQ9NSE2 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.74□□□□□ -1.65
CISHQ9NSE2 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CISHQ9NSE2 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.74□□□□□ -1.65
CISHQ9NSE2 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CISHQ9NSE2 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CISHQ9NSE2 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
CISHQ9NSE2 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.73□□□□□ -1.65
CISHQ9NSE2 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CISHQ9NSE2 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.73□□□□□ -1.65
CISHQ9NSE2 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CISHQ9NSE2 RNU1-20P-201ENST00000363314 162 ntBASIC4.73□□□□□ -1.65
CISHQ9NSE2 RNU1-44P-201ENST00000384453 163 ntBASIC4.73□□□□□ -1.65
CISHQ9NSE2 MIR3065-201ENST00000390137 79 ntBASIC4.73□□□□□ -1.65
CISHQ9NSE2 SNORA74C-2-201ENST00000411179 201 ntBASIC4.73□□□□□ -1.65
CISHQ9NSE2 RPS20P14-201ENST00000412545 360 ntBASIC4.73□□□□□ -1.65
CISHQ9NSE2 CEACAMP8-201ENST00000413902 580 ntBASIC4.73□□□□□ -1.65
CISHQ9NSE2 AL139095.3-201ENST00000419672 1203 ntBASIC4.73□□□□□ -1.65
CISHQ9NSE2 AL356387.2-201ENST00000422272 243 ntBASIC4.73□□□□□ -1.65
CISHQ9NSE2 RPS27AP7-201ENST00000422792 455 ntBASIC4.73□□□□□ -1.65
CISHQ9NSE2 CNOT7P1-201ENST00000429006 852 ntBASIC4.73□□□□□ -1.65
CISHQ9NSE2 HSPE1P27-201ENST00000430808 296 ntBASIC4.73□□□□□ -1.65
CISHQ9NSE2 RPL12P28-201ENST00000430852 489 ntBASIC4.73□□□□□ -1.65
CISHQ9NSE2 VN1R32P-201ENST00000452234 905 ntBASIC4.73□□□□□ -1.65
CISHQ9NSE2 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.73□□□□□ -1.65
CISHQ9NSE2 DHFRP3-201ENST00000455595 559 ntBASIC4.73□□□□□ -1.65
CISHQ9NSE2 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.73□□□□□ -1.65
CISHQ9NSE2 snoU13.1-201ENST00000459157 104 ntBASIC4.73□□□□□ -1.65
CISHQ9NSE2 RN7SL459P-201ENST00000481078 302 ntBASIC4.73□□□□□ -1.65
CISHQ9NSE2 RNA5SP228-201ENST00000516232 133 ntBASIC4.73□□□□□ -1.65
CISHQ9NSE2 AC090151.1-201ENST00000520784 730 ntBASIC4.73□□□□□ -1.65
CISHQ9NSE2 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.73□□□□□ -1.65
CISHQ9NSE2 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.73□□□□□ -1.65
CISHQ9NSE2 AC068831.4-201ENST00000556118 109 ntBASIC4.73□□□□□ -1.65
CISHQ9NSE2 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.73□□□□□ -1.65
CISHQ9NSE2 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.73□□□□□ -1.65
CISHQ9NSE2 AC068790.4-201ENST00000602474 263 ntBASIC4.73□□□□□ -1.65
CISHQ9NSE2 AC008745.1-201ENST00000604064 271 ntBASIC4.73□□□□□ -1.65
CISHQ9NSE2 AC007546.2-201ENST00000623996 360 ntBASIC4.73□□□□□ -1.65
CISHQ9NSE2 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.73□□□□□ -1.65
CISHQ9NSE2 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.73□□□□□ -1.65
CISHQ9NSE2 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
CISHQ9NSE2 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CISHQ9NSE2 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CISHQ9NSE2 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CISHQ9NSE2 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CISHQ9NSE2 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CISHQ9NSE2 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.72□□□□□ -1.65
CISHQ9NSE2 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.72□□□□□ -1.65
CISHQ9NSE2 AC025031.4-201ENST00000621248 3271 ntBASIC4.72□□□□□ -1.65
CISHQ9NSE2 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.72□□□□□ -1.65
CISHQ9NSE2 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CISHQ9NSE2 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.72□□□□□ -1.65
CISHQ9NSE2 AC068870.3-201ENST00000625077 2536 ntBASIC4.72□□□□□ -1.65
CISHQ9NSE2 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.72□□□□□ -1.65
CISHQ9NSE2 AC008033.1-201ENST00000216407 1162 ntBASIC4.72□□□□□ -1.65
CISHQ9NSE2 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CISHQ9NSE2 AL078604.1-201ENST00000404609 466 ntBASIC4.72□□□□□ -1.65
CISHQ9NSE2 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.72□□□□□ -1.65
CISHQ9NSE2 SEPT7P8-201ENST00000413308 775 ntBASIC4.72□□□□□ -1.65
CISHQ9NSE2 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.72□□□□□ -1.65
CISHQ9NSE2 AC114495.1-201ENST00000441274 436 ntBASIC4.72□□□□□ -1.65
CISHQ9NSE2 RPS27AP15-201ENST00000447672 466 ntBASIC4.72□□□□□ -1.65
CISHQ9NSE2 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CISHQ9NSE2 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.72□□□□□ -1.65
CISHQ9NSE2 RNU6-964P-201ENST00000516524 69 ntBASIC4.72□□□□□ -1.65
CISHQ9NSE2 IGLVIV-65-201ENST00000517313 360 ntBASIC4.72□□□□□ -1.65
CISHQ9NSE2 OR8G5-201ENST00000524943 1041 ntBASIC4.72□□□□□ -1.65
CISHQ9NSE2 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.72□□□□□ -1.65
CISHQ9NSE2 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CISHQ9NSE2 AC010487.1-201ENST00000594408 1172 ntBASIC4.72□□□□□ -1.65
CISHQ9NSE2 AC079587.1-201ENST00000603846 277 ntBASIC4.72□□□□□ -1.65
CISHQ9NSE2 Z98200.1-201ENST00000607298 470 ntBASIC4.72□□□□□ -1.65
CISHQ9NSE2 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.72□□□□□ -1.65
CISHQ9NSE2 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.72□□□□□ -1.65
CISHQ9NSE2 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CISHQ9NSE2 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.72□□□□□ -1.65
CISHQ9NSE2 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.72□□□□□ -1.65
CISHQ9NSE2 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.72□□□□□ -1.65
CISHQ9NSE2 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CISHQ9NSE2 AC092435.4-201ENST00000623012 4159 ntBASIC4.72□□□□□ -1.65
CISHQ9NSE2 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.72□□□□□ -1.65
CISHQ9NSE2 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CISHQ9NSE2 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CISHQ9NSE2 RNA5SP447-201ENST00000363749 119 ntBASIC4.71□□□□□ -1.66
CISHQ9NSE2 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
CISHQ9NSE2 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CISHQ9NSE2 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.71□□□□□ -1.66
CISHQ9NSE2 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.71□□□□□ -1.66
CISHQ9NSE2 RPEP2-201ENST00000432149 701 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms