Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 SPATA2P1-201ENST00000431223 2055 ntBASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 MIR765-201ENST00000390226 114 ntBASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 DNAJC19P6-201ENST00000401853 280 ntBASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 RPS26P38-201ENST00000414476 348 ntBASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 RPS26P13-201ENST00000419030 330 ntBASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 AL133173.1-201ENST00000423458 397 ntBASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 AC009784.1-201ENST00000426484 460 ntBASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 RPS3AP38-201ENST00000435889 763 ntBASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 AL592437.1-201ENST00000443781 492 ntBASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 FAR2P1-206ENST00000449736 709 ntBASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 CBX1P2-201ENST00000453841 458 ntBASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 RPS21P4-201ENST00000487122 248 ntBASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 AC021146.8-201ENST00000507455 733 ntBASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 AC008549.1-201ENST00000512900 643 ntBASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 snoU109.5-201ENST00000516231 132 ntBASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 MTND4LP26-201ENST00000518144 282 ntBASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 NDUFA5P2-201ENST00000519723 344 ntBASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 MTCO3P15-201ENST00000526563 574 ntBASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 MTND4LP18-201ENST00000526864 291 ntBASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 OR8G3P-201ENST00000533406 921 ntBASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 AC019131.2-201ENST00000609071 870 ntBASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 AC109347.2-201ENST00000610220 349 ntBASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 AC004223.4-201ENST00000612426 332 ntBASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 AP001784.1-201ENST00000624107 428 ntBASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.4□□□□□ -1.38
PDLIM7Q9NR12 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
PDLIM7Q9NR12 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PDLIM7Q9NR12 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
PDLIM7Q9NR12 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.4□□□□□ -1.39
PDLIM7Q9NR12 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PDLIM7Q9NR12 GTF2IP4-201ENST00000453092 2054 ntBASIC6.4□□□□□ -1.39
PDLIM7Q9NR12 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.39
PDLIM7Q9NR12 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
PDLIM7Q9NR12 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 GNG5P2-201ENST00000372054 207 ntBASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 OR2W4P-201ENST00000406496 926 ntBASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 RNU6ATAC25P-201ENST00000408798 117 ntBASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 RNU2-22P-201ENST00000411266 212 ntBASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 FCF1P9-201ENST00000412546 282 ntBASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 AL049610.1-201ENST00000423374 372 ntBASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 AC092017.2-201ENST00000427600 362 ntBASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 GCA-203ENST00000429691 824 ntTSL 3 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 HMGB3P10-201ENST00000434734 572 ntBASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 VN1R54P-201ENST00000435210 1049 ntBASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 AL050341.1-201ENST00000447743 313 ntBASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 AC107015.1-201ENST00000466902 747 ntBASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 RPL30P6-201ENST00000475925 342 ntBASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 RN7SL570P-201ENST00000484405 292 ntBASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 AC069304.1-201ENST00000491593 704 ntBASIC6.39□□□□□ -1.39
PDLIM7Q9NR12 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms