Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 NDUFA5P12-201ENST00000503796 343 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 AC011352.3-201ENST00000505162 593 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 AC010343.2-201ENST00000510162 224 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 AC009646.1-201ENST00000510455 318 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 MTCO2P4-201ENST00000517968 247 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 OSBPL9P2-201ENST00000526582 1228 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSU72Q9NP77 AC027229.1-201ENST00000583887 253 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 AC008752.3-201ENST00000588113 712 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 EXOSC3P2-201ENST00000594464 497 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 RPS27AP19-201ENST00000597285 458 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 AL596327.1-201ENST00000603629 213 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSU72Q9NP77 SNORD96A-201ENST00000606577 79 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 AC006924.1-201ENST00000610750 559 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSU72Q9NP77 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSU72Q9NP77 AL359535.1-201ENST00000612100 1087 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 AC005332.6-201ENST00000613178 446 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 AC079228.1-201ENST00000624774 1049 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 MKKS-204ENST00000639674 192 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSU72Q9NP77 WDR95P-201ENST00000425638 1542 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 ZNF37BP-203ENST00000452306 1352 ntBASIC6.28□□□□□ -1.4
SSU72Q9NP77 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
SSU72Q9NP77 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSU72Q9NP77 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SSU72Q9NP77 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SSU72Q9NP77 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC6.27□□□□□ -1.4
SSU72Q9NP77 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
SSU72Q9NP77 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSU72Q9NP77 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSU72Q9NP77 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSU72Q9NP77 AL031985.3-201ENST00000565390 2449 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 CYP1D1P-201ENST00000416662 1433 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSU72Q9NP77 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SSU72Q9NP77 RNU6-532P-201ENST00000384318 107 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 VIM2P-201ENST00000402383 1294 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 AL589647.1-201ENST00000402485 466 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 EEF1A1P40-201ENST00000412883 573 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 B3GALNT1P1-201ENST00000420569 975 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SSU72Q9NP77 AL157884.1-201ENST00000424561 454 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 ELOCP14-201ENST00000428070 331 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 AC005033.1-201ENST00000428904 813 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 USP24P1-201ENST00000433802 779 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 AC073410.1-201ENST00000435125 589 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 RPL7P11-201ENST00000437586 658 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 ELOCP7-201ENST00000439968 331 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 RGS5-217ENST00000451759 835 ntTSL 3 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 OFD1P4Y-201ENST00000455273 1179 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 AC112187.1-201ENST00000455837 479 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 UOX-201ENST00000471089 899 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 AC074386.1-201ENST00000476560 767 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 RPS29P25-201ENST00000481709 171 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 AC025271.1-201ENST00000485045 429 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 AC097173.1-201ENST00000505862 819 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 AC024589.1-201ENST00000512207 263 ntBASIC6.27□□□□□ -1.41
SSU72Q9NP77 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.27□□□□□ -1.41
SSU72Q9NP77 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms