Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 AL672167.1-204ENST00000641875 3017 ntBASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 AL445437.1-201ENST00000623157 3087 ntBASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
TM9SF3Q9HD45 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 AC011155.1-201ENST00000316512 456 ntBASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 GLULP6-201ENST00000399502 913 ntBASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 AL390316.1-201ENST00000406279 553 ntBASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 RN7SKP16-201ENST00000410180 299 ntBASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 GTF2IP5-201ENST00000414608 731 ntBASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 AC068287.1-201ENST00000430283 295 ntBASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 AC009238.2-201ENST00000431026 355 ntBASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 SLC25A18P1-201ENST00000449385 454 ntBASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 BX842559.2-201ENST00000451418 605 ntBASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 CALM1P2-201ENST00000452941 448 ntBASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 AC091180.1-201ENST00000462104 372 ntBASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 AC092905.1-201ENST00000467527 949 ntBASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 AC093720.1-201ENST00000505681 714 ntBASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 PGBD4P4-201ENST00000509673 613 ntBASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 IGHV3-63-201ENST00000518422 341 ntBASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 AP001880.2-201ENST00000538233 448 ntBASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 AC068790.7-201ENST00000602347 528 ntBASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 AC090948.2-201ENST00000607363 564 ntBASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 AC015871.5-202ENST00000623252 701 ntBASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.93□□□□□ -1.62
TM9SF3Q9HD45 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 SNORA70.10-201ENST00000384515 134 ntBASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 SNORD65-201ENST00000391079 73 ntBASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 ATP5HP3-201ENST00000396994 486 ntBASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 MIR298-201ENST00000401212 88 ntBASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 RNU6-603P-201ENST00000411403 107 ntBASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 AC069213.2-201ENST00000420238 366 ntBASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 GSTA7P-201ENST00000438425 448 ntBASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 AC092013.1-201ENST00000438795 332 ntBASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 RPS29P9-201ENST00000440360 171 ntBASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 ELOCP10-201ENST00000440624 327 ntBASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 CCRL1P1-201ENST00000449542 1053 ntBASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 AURKAPS2-201ENST00000454983 333 ntBASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 RPL31P53-201ENST00000457065 348 ntBASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 HPRT1P1-201ENST00000509498 657 ntBASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 BTG4P1-201ENST00000510421 183 ntBASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 AC012339.2-201ENST00000523996 453 ntBASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 TVP23CP2-201ENST00000571473 623 ntBASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 ELOCP34-201ENST00000604436 327 ntBASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 AC104687.2-201ENST00000604442 342 ntBASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.92□□□□□ -1.62
TM9SF3Q9HD45 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms