Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AL645931.1-201ENST00000439737 410 ntBASIC5.1□□□□□ -1.59
PCDH9Q9HC56 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 TCEA1P1-201ENST00000449716 880 ntBASIC5.1□□□□□ -1.59
PCDH9Q9HC56 MYO5BP2-201ENST00000449815 1277 ntBASIC5.1□□□□□ -1.59
PCDH9Q9HC56 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 RPSAP50-201ENST00000481955 852 ntBASIC5.1□□□□□ -1.59
PCDH9Q9HC56 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 AC073358.1-201ENST00000505671 684 ntBASIC5.1□□□□□ -1.59
PCDH9Q9HC56 AC004980.4-201ENST00000513375 203 ntBASIC5.1□□□□□ -1.59
PCDH9Q9HC56 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 DDX18P5-201ENST00000534547 1306 ntBASIC5.1□□□□□ -1.59
PCDH9Q9HC56 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 AC084759.1-201ENST00000561168 290 ntBASIC5.1□□□□□ -1.59
PCDH9Q9HC56 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 MTCO3P22-201ENST00000603219 784 ntBASIC5.1□□□□□ -1.59
PCDH9Q9HC56 AC105254.2-201ENST00000603636 436 ntBASIC5.1□□□□□ -1.59
PCDH9Q9HC56 AC087783.2-201ENST00000605070 562 ntBASIC5.1□□□□□ -1.59
PCDH9Q9HC56 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 AC005156.1-201ENST00000613371 573 ntBASIC5.1□□□□□ -1.59
PCDH9Q9HC56 AL049794.2-201ENST00000616301 365 ntBASIC5.1□□□□□ -1.59
PCDH9Q9HC56 AC016769.4-201ENST00000616893 535 ntBASIC5.1□□□□□ -1.59
PCDH9Q9HC56 AC010608.3-201ENST00000625048 527 ntBASIC5.1□□□□□ -1.59
PCDH9Q9HC56 AL445984.1-201ENST00000637834 659 ntBASIC5.1□□□□□ -1.59
PCDH9Q9HC56 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 ECM1P2-201ENST00000503354 1577 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 CASC19-206ENST00000641028 1430 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 AC008549.2-201ENST00000333482 706 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 RNA5SP455-201ENST00000365190 119 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 AP000580.1-201ENST00000404439 358 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 MTATP6P31-201ENST00000406985 692 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 MTND4P11-201ENST00000417020 1058 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 OR6C64P-201ENST00000419708 825 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 AL512637.2-201ENST00000431287 1256 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 AC092162.1-201ENST00000432828 434 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 AC011242.1-201ENST00000433596 1158 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 RPL34P20-201ENST00000442771 351 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 MTCYBP21-201ENST00000443300 1113 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 AL589765.3-201ENST00000446084 462 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 CYCSP34-201ENST00000458172 304 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 RN7SL214P-201ENST00000487317 265 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 RN7SL244P-201ENST00000493405 297 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 COX6B1P5-201ENST00000509843 249 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 AC147055.3-201ENST00000510547 851 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 OR7E128P-201ENST00000532736 1024 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 AC068993.1-201ENST00000546724 589 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 HMGN2P6-201ENST00000551091 273 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 NMNAT1P1-201ENST00000554095 876 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 MIR4675-201ENST00000577898 77 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 DPRXP4-201ENST00000578053 568 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 AC245884.10-201ENST00000597355 337 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 AC093799.2-201ENST00000610062 578 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 AL627230.1-201ENST00000613077 211 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDH9Q9HC56 AL591926.8-201ENST00000616876 211 ntBASIC5.09□□□□□ -1.59
PCDH9Q9HC56 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms